List of Database Records (records: 2186)
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Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Arabidopsis thaliana
Description:
This is a database of Arabidopsis cDNA sequence information that can be searched by gene description...
Database maintenance site:
San Diego Supercomputer Center
Organism(s) covered:
Description:
This system integrates information on protein kinases (sequences, conformations, annotations) and al...
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EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Description:
This is a public repository for proteomics data, containing identification data on mass spectrometri...
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Purdue University
Organism(s) covered:
Description:
This database contains information on plant transporters. It provides information about proteins (na...
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EMBL-EBI (European Bioinformatics Institute)
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Description:
PDBsum is a database that contains the annotated 3-dimensional structures of all the proteins in the...
Database maintenance site:
University of Manchester Bioinformatics Education and Research
Organism(s) covered:
Homo sapiens
Description:
OWL Version 31.1 is a database comprised of the results of a comparative study of 4 sources of seque...
Database maintenance site:
Stanford University
Organism(s) covered:
Description:
Okdb is a database of genes related to the biological function, expression patterns, and regulation ...
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BBOP （Berkeley Bioinformatics Open-source Project）
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Description:
The OBO Foundry provides a catalog of ontologies used in medicine or life sciences. Users can find d...
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Census of Marine Life
Organism(s) covered:
Description:
OBIS is a integrated database of marine biogeographic data from all over the world. It contains info...
Database maintenance site:
Bioinformatics Research Group, Institute of Computing Technology, Chinese Academy of Sciences.
Organism(s) covered:
Description:
NONCODE is a comprehensive database of noncoding RNAs, excluding tRNAs and rRNAs, from an extensive ...
Inactive
Myc Cancer Gene
Database maintenance site:
Johns Hopkins University
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus | Gallus gallus | Drosophila melanogaster
Description:
Database maintenance site:
Mammalian Genetics Laboratory, National Institute of Genetics
Organism(s) covered:
Mus musculus
Description:
Mouse genetic Resources is a database of available mouse strains established in the Mammalian geneti...
Database maintenance site:
University of Connecticut, University of Nevada
Organism(s) covered:
Description:
MnM is a database for short sequence motifs in protein. It provides information of short contiguous ...
Suspend
MAEDA: Micro Array Expression DAta search
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Arabidopsis thaliana
Description:
MAEDA is a database of Arabidopsis gene expression profiles that can be searched by gene ID. Express...
Database maintenance site:
The University of Queensland
Organism(s) covered:
Mus musculus
Description:
LOCATE is a database containing information on how and where in the cell and its membrane proteins a...
INE: INtegrated Rice Genome Explorer : INE
Database maintenance site:
National Institute of Agrobiological Sciences
Organism(s) covered:
Oryza sativa
Description:
Database maintenance site:
CNRS (The National Centre for Scientific Research), Montpellier University, Montpellier
Organism(s) covered:
Description:
This is a sequence database with annotations on immunoglobulins and T-cell receptors of humans and o...
Suspend
IARC TP53 Database
Database maintenance site:
International Agency for Research on Cancer
Organism(s) covered:
Homo sapiens
Description:
IARC TP53 Database is a database about mutations, genetic diseases and anotations on human p53. It c...
Database maintenance site:
The Centre for Applied Genomics
Organism(s) covered:
Homo sapiens
Description:
Database maintenance site:
Universita degli Studi del Sannio di Benevento
Organism(s) covered:
Homo sapiens
Description:
HS3D (Homo Sapiens Splice Sites Dataset) version 1.2 is a database that contains information on huma...
Database maintenance site:
Natural History Museum
Organism(s) covered:
Lepidoptera
Description:
HOSTS is a database that provides information on the host plants for Lepidoptera, an order of insect...
Suspend
Hoppsigen: Homologous Processed Pseudogenes database
Database maintenance site:
Pole Bioinformatique Lyonnais
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
Hoppsigen is a nucleic database.
It provides information on homologous retroelements (like SINE and ...
Suspend
HOVERGEN: Homologous Vertebrate Genes Database
Database maintenance site:
Pole Bioinformatique Lyonnais
Organism(s) covered:
Description:
HOVERGEN is a database of homologous vertebrate genes using the ACNUC sequence database. It contains...
Suspend
RIKEN Hub Database Project
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Homo sapiens | Mus musculus | Caenorhabditis elegans | Arabidopsis thaliana
Description:
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Description:
GOALL is a tool for visualization of interrelated data. The viewer graphically plots data, which can...
Database maintenance site:
The Invasive Species Specialist Group
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Description:
The GISD is a database of information about species that negatively impact biodiversity. It contains...
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Kyoto University Institute for Chemical Research Bioinformatics Center
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Description:
GenomeNet is a Japanese network of database resources and bioinformatics tools constructed by Kyoto ...
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Weizmann Institute of Science
Organism(s) covered:
Homo sapiens
Description:
geneLoc Version 3.09 is a database consisting of integrated maps for all human chromosomes.
Each gen...
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Genomics Institute of the Novartis Research Foundation
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
This site collects information of genes, and has customizability and extensibility features.The data...
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NCBI (National Center for Biotechnology Information)
Organism(s) covered:
All
Description:
This is a public database of DNA sequences with annotations. It is a part of the International Nucle...
Database maintenance site:
Universite Rene Descartes
Organism(s) covered:
Homo sapiens
Description:
Genatlas is a collection of information on gene mapping and the diseases they are genetically relate...
Database maintenance site:
Office of Biotechnology Activities
Organism(s) covered:
Homo sapiens
Description:
The GeMCRIS is a resource that provides information of human gene transfer research registred with t...
Database maintenance site:
University of Washington
Organism(s) covered:
Homo sapiens
Description:
FMA is a computer-based knowledge source for biomedical informatics. This site is open source and av...
Inactive
FMRIDC: The fMRI Data Center
Database maintenance site:
University of California
Organism(s) covered:
Homo sapiens
Description:
Database maintenance site:
FishBase Consortium
Organism(s) covered:
Description:
FishBase is a relational database containing information about fish around the world to cater to dif...
Database maintenance site:
Cardiff University School of Medicine
Organism(s) covered:
Homo sapiens
Description:
FIDD (Frequency of Inherited Disorders Database) belongs to the Institute of Medical genetics at the...
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SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:
Description:
EROP(Endogenous Regulatory OligoPeptide)-Moscow is a database that provides information on a collect...
Database maintenance site:
SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
ExPASy ENZYME is a database of the classified naming system of enzymes and information related to th...
Suspend
EGO: Eukaryotic Gene Orthologues
Database maintenance site:
Dana-Farber Cancer Institute
Organism(s) covered:
Eukaryota
Description:
Database maintenance site:
SRI International
Organism(s) covered:
Escherichia coli
Description:
This is a database provides information on genes, metabolites, reactions, operons and metabolic path...
Database maintenance site:
Institute of Genome Sciences, University of Maryland School of Medicine
Organism(s) covered:
Homo sapiens
Description:
This site provides a Disease Ontology, which is a standardized ontology organized by human disease t...
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EMBL-EBI (European Bioinformatics Institute)
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Description:
DGVa (Database of Genomic Variants archive) is a repository that offers the storage of, access to an...
Database maintenance site:
Salk Institute
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Description:
This is a database of target genes for the transcription factor CREB (cyclic AMP response element-bi...
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NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
This site contains annotations and tools for protein domain structures. It is comprised of:
(1) Con...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Homo sapiens | Arabidopsis thaliana | Aspergillus nidulans | Bacillus subtilis | Bombyx mori | ...
Description:
Codon Table is a database of mRNA codon interpretations and statistics, such as frequency of use in ...
Suspend
CGAP: The Cancer Genome Anatomy Project
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
This database is a collection of gene expression profiles of normal, precancer, and cancer cells. I...
Database maintenance site:
The University of Alabama
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus | Drosophila melanogaster | Caenorhabditis elegans
Description:
CarpeDB is a portal database of epilepsy genetics. It contains information of epilepsy genes and ass...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research) Wako Institute
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
CAGE Viewer is a database of mouse CAGE sequencing information. The database contains sequences and ...
Suspend
Blocks
Database maintenance site:
Fred Hutchinson Cancer Research Center
Organism(s) covered:
Homo sapiens
Description:
This is a database of automatically extracted motifs from multiple amino acid sequence alignments of...
Database maintenance site:
SRI International
Organism(s) covered:
Agrobacterium tumefaciens | Bacillus subtilis | Caulobacter vibrioides | Chlamydia trachomatis | Escherichia coli O157:H7 | ...
Description:
This is a collection of metabolic pathways and their genomes for each species. It contains predictio...