List of Database Records (records: 2187)
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Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Description:
ArrayExpress is a database of experiments related to the structure, function, evolution, and mapping...
Suspend
ARCHAIC: Archaebacterial Information Collection
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Pyrococcus sp. OT3 | Thermoplasma volcanium GSS1 | Archaeoglobus fulgidus
Description:
ARCHAIC stands for 'ARCHAebacterial Information Collection' is a database of analyzed archaebacteria...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
The AAindex database collects and organizes amino acid properties. Users can search from dozens of s...
Database maintenance site:
The University of Tokyo Graduate School of Frontier Sciences
Organism(s) covered:
Homo sapiens
Description:
Database maintenance site:
Kyushu Institute of Technology
Organism(s) covered:
Description:
3DinSight is a database that helps users explore the relationship between the structure, function, a...
Database maintenance site:
Department of Electrical Engineering, National Cheng Kung University
Organism(s) covered:
Saccharomyces cerevisiae
Description:
YPA is a database which collected comprehensive promoter features in Saccharomyces cerevisiae. The d...
Suspend
RIKEN Plant Hormone Research Network
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Arabidopsis thaliana
Description:
RIKEN Plant Hormone Research Network consists of six research groups related to plant hormone study....
Database maintenance site:
QFAB (Queensland Facility for Advanced Bioinformatics)
Organism(s) covered:
Araneae
Description:
ArachnoServer is a manually curated database which contains information on the sequence, three-dimen...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Description:
Cell lines in RIKEN BioResource Center is a database of resource information maintained by RIKEN BRC...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Mus musculus
Description:
Mouse strain in RIKEN BioResource Center is a database of resource information maintained by RIKEN B...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Description:
Kazusa Molecular Formula Searcher (MFSearcher) is a RESTful Web service that provides researchers wi...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus | Arabidopsis thaliana
Description:
This is a database of nucleotide sequences of ESTs, cDNAs and oligo DNA microarray probes for Lotus ...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus
Description:
FuLoJa stands for Lotus japonicus Full-length cDNA Databases and includes full-length cDNA sequences...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
SSBC is a database about structures and functions of proteins elucidated at "National Project on Pro...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus
Description:
This database contains 98838 EST and 3488 full-length cDNA sequences of Lotus. japonicus, a model le...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Description:
MS-MS Fragment Viewer is a metabolomics database of the LC-FT/ICR-MS measurements of authentic compo...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Arabidopsis thaliana | Solanum lycopersicum | Brassica oleracea var. capitata | Chlamydomonas reinhardtii | Dicksonia antarctica | ...
Description:
KomicMarket (Kazusa Omics Data Market) is a database that contains annotations of metabolite peaks t...
Database maintenance site:
University of Alberta/Department of Computing Science
Organism(s) covered:
Description:
DrugBank is a database of detailed informatics resources on approved and experimental drugs. The dat...
Database maintenance site:
Nara Institute of Science and Technology Graduate School of Biological Sciences
Organism(s) covered:
Mus musculus
Description:
NAISTrap is a database of clones listed in a table.
Each clone is identified by its clone number (s...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Mus musculus
Description:
The Animal Resource Bank collects and provides mouse models of human disease (lysosomal disease mode...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Homo sapiens | Mus musculus | Pan troglodytes | Macaca fascicularis
Description:
JCRB gene Bank (Japanese Collection of Research Bioresources) provides research resources to worldwi...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Homo sapiens | Rattus | Mus musculus | Oryctolagus cuniculus | Cricetinae | ...
Description:
Medical Bioresource Database (MBRDB) is a database of localization and availability of biospecimens ...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Homo sapiens
Description:
Rare Disease Bank was established by the Ministry of Health, Labour and Welfare, Japan in 2009. The ...
Inactive
Open TG-GATEs
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Homo sapiens | Rattus norvegicus
Description:
Open TG-GATES is a toxicogenomics database. It stores gene expression data from rat liver and kidney...
Closed
GENE-TOX: Genetic Toxicology Data Bank
Database maintenance site:
NLM (National Library of Medicine)
Organism(s) covered:
Description:
gene-TOX is a database of toxic effects of chemical compounds on genetic material. The database cont...
Closed
DART: Developmental and Reproductive Toxicology Database
Database maintenance site:
NLM (National Library of Medicine)
Organism(s) covered:
Description:
DART is a database of toxicity pertaining to development and reproduction. The database contains inf...
Closed
TOXLINE: Toxicology Literature Online
Database maintenance site:
NLM (National Library of Medicine)
Organism(s) covered:
Description:
TOXLINE is a database of toxicology literature. The database contains links to primary literature on...
Closed
CCRIS: Chemical Carcinogenesis Research Information System
Database maintenance site:
NLM (National Library of Medicine)
Organism(s) covered:
Description:
CCRIS is a database of carcinogenic information. The database contains information related to the ca...
Closed
HSDB: Hazardous Substances Data Bank
Database maintenance site:
NLM (National Library of Medicine)
Organism(s) covered:
Description:
HSDB is a database of hazardous substances. The database contains information on toxic compounds gat...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
All
Description:
genetic resources center in NARO (National Agriculture and Food Research Organization) provides info...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Embryophyta
Description:
This is a database of plant diseases created on the basis of a catalog, "Common names of plant disea...
Database maintenance site:
Kyushu University Faculty of Agriculture
Organism(s) covered:
Hexapoda
Description:
ELKUType is a database of information on type specimens preserved in the Entomological Laboratory, K...
Database maintenance site:
Kyushu University Faculty of Agriculture
Organism(s) covered:
Apis mellifera
Description:
HANABACHI is an image database covering all the species of the Japanese bees. The data on family And...
Database maintenance site:
Kyushu University Faculty of Agriculture
Organism(s) covered:
Encyrtidae
Description:
TOBIKOBACHI is the image database of Japanese encyrtid wasps based on the collection of Dr. Tetsusab...
Database maintenance site:
Tokyo Metropolitan University
Organism(s) covered:
Adiantum capillus-veneris
Description:
AcEST is a database of fern EST data. The database contains sequences expressed in Adiantum capillus...
Database maintenance site:
National Institute for Basic Biology
Organism(s) covered:
Embryophyta
Description:
PODB3 is a collection of databases describing organelles and their behavior in plants. The site cont...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Acacia mangium | Arabidopsis thaliana | Cosmos bipinnatus | Dicksonia antarctica | Escherichia coli | ...
Description:
MassBase is a fundamental archive of mass spectral tags (MST) for metabolomics. It includes both kno...
Closed
WhoGA: Whole Genome Annotation
Database maintenance site:
National Institute of Agrobiological Sciences
Organism(s) covered:
Oryza sativa
Description:
Closed
VectorDB
Database maintenance site:
Stanford University
Organism(s) covered:
Eukaryota | Bacteria | Viruses
Description:
Vector DB is a database of genetic constructs used in molecular biology. The database contains seque...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Description:
This database of THz spectroscopic measurements of several biologically relevant compounds contains ...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Mus musculus
Description:
TFdb is a database of mouse transcription factors. The database contains information on known transc...
Closed
SWISS-2DPAGE: SWISS-Two-dimensional polyacrylamide gel electrophoresis database
Database maintenance site:
SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:
Homo sapiens | Mus musculus | Arabidopsis thaliana | Dictyostelium discoideum | Escherichia coli | ...
Description:
SWISS-2DPAGE is a database of proteomic information. The database contains images and identified pro...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Rattus norvegicus
Description:
Rat Strain List is a database of rat resources maintained by RIKEN BioResource Center (RIKEN BRC). E...
Closed
SABRE: Systematic consolidation of Arabidopsis and other Botanical REsource
Database maintenance site:
RIKEN Tsukuba Institute
Organism(s) covered:
Arabidopsis thaliana | Thellungiella halophila | Nicotiana tabacum | Manihot esculenta | Populus nigra | ...
Description:
SABRE is a database of plant resources. The database contains collected information about Arabidopsi...
Closed
RPOPDB: RIKEN Populus Database
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Populus
Description:
RPOPDB is a Populus genome sequence resource with genome browser and search functions to explore the...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Manihot esculenta
Description:
This is a database of cassava cDNA clones with 5' and 3' sequence information for each clone. Users ...
Closed
RIKEN Mouse Genome Encyclopedia DNABook
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Mus musculus
Description:
Closed
RIKEN Hub Database
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Description:
RIKEN Hub Database is an integrated database of data resources published by RIKEN. Thid database con...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Arabidopsis thaliana | Physcomitrella patens | Manihot esculenta | Populus | Nicotiana tabacum | ...
Description:
This is a tool for BLAST searching multiple plant species. The website contains a sequence input win...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Description:
JCM is a database of cultured microbial strains and their genomic DNA samples maintained by RIKEN Bi...