Database Record
RefSeq: Reference Sequence
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC00187 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Database nameName of the database | RefSeq | ||||||||||||
| Alternative nameAlternative name of the database | Reference Sequence | ||||||||||||
| URLURL of the database | https://www.ncbi.nlm.nih.gov/refseq/ | ||||||||||||
| Database maintenance siteSite maintaining the database | NCBI (National Center for Biotechnology Information) | ||||||||||||
| Country/RegionCountry or region name where the database maintenance site is located | United States | ||||||||||||
| Database descriptionDatabase descirption | RefSeq is a database of standard reference genomic, transcript, and protein sequences. The database contains consensus sequence data for over 20,000 organisms and over 27 million proteins and is designed to provide a common basis for experimental studies that can be searched using accession ID, keyword, or BLAST. Bulk data is available for FTP download. | ||||||||||||
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | Eukaryota (2759), Bacteria (2), Archaea (2157), Avsunviroidae (185752), Pospiviroidae (185751), unclassified viroids (265963), Viruses (10239) | ||||||||||||
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
|
||||||||||||
| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
|
||||||||||||
| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database |
|
||||||||||||
| Language(s)Languages in which the contents of the database are displayed | English | ||||||||||||
| Operational statusOperational status for the database | Active | ||||||||||||
| Link(s) to Downloadable dataLinks to downloadable data | ftp://ftp.ncbi.nlm.nih.gov/refseq/, ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/ | ||||||||||||
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ftp://ftp.ncbi.nlm.nih.gov/refseq/, ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/ | ||||||||||||
| Link(s) to Terms of useLinks to terms of use of downloadable data | https://www.ncbi.nlm.nih.gov/home/about/policies.shtml | ||||||||||||
| Link(s) to "How to use" | ― | ||||||||||||
| Contact information of database | ― | ||||||||||||
| Link(s) to API / SPARQL endpoint | ― | ||||||||||||
| Link to LSDB ArchiveLink to LSDB Archive | ― | ||||||||||||
| Link to MEDALS Database listLink to MEDALS Database list | ― | ||||||||||||
| Link to TogoTVLink to TogoTV | ― | ||||||||||||
| Link to FAIRsharingLink to FAIRsharing | https://fairsharing.org/biodbcore-000457 | ||||||||||||
| Similar databasesDatabases that are similar to this database. | |||||||||||||
| Record maintainerRecord maintainer | Integbio Database Catalog | ||||||||||||
| Record sourceOrganization that originally created the record |
|
||||||||||||
| Date of creation of this recordDate of creation of this English record | 2013-06-17 | ||||||||||||
| Last update date of this recordLast update date of this English record | 2022-09-15 | ||||||||||||
| Record license | Creative Commons CC0 license |