List of Database Records (records: 2170)
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Database maintenance site:
National Institute for Basic Biology
Organism(s) covered:
Physcomitrella patens
Description:
PHYSCObase is a database for sharing information on the moss Physcomitrella patens, which provides a...
Database maintenance site:
Stanford University
Organism(s) covered:
Homo sapiens
Description:
PharmGKB is a database of genotype-drug response knowledge. The database contains information about ...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Description:
Pfam Version 26.0 is a comprehensive database of protein families containing multiple sequence align...
Database maintenance site:
National Cardiovascular Center Research Institute
Organism(s) covered:
Mus musculus | Rattus norvegicus | Sus scrofa
Description:
PEPTIDOME is a database for endogenous peptides in cells, tissues and body. PEPTIDOME contains molec...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Sus scrofa
Description:
This database provides sequencing information for genome (contigs), cDNAs and cSNPs (SNPs on cDNAs) ...
Database maintenance site:
German Research Center for Environmental Health
Organism(s) covered:
Description:
PEDANT 3 is a database of information regarding the extraction, description and analysis of proteins...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Escherichia coli
Description:
PEC is a database for characterization of the E. coli genome and each gene's function. This database...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
This database was reorganized the data of PDB (Protein Data Bank) to suit sequence analysis by the I...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
All
Description:
PDBj in Japan maintains a single PDB archive of macromolecular structural data in conjunction with t...
Database maintenance site:
wwPDB consortium
Organism(s) covered:
All
Description:
This is an international public repository for three-dimensional structures and structure coordinate...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Bacteria | Archaea
Description:
National Bioresource Project - 'Pathogenic microbes' collects reliable strains of pathogenic microor...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Homo sapiens
Description:
OMIM is a database of human disease and genetic information and the online representation of Mendeli...
Database maintenance site:
University of Sydney
Organism(s) covered:
Description:
OMIA is a database of inherited disorders, other (single-locus) traits, and genes in animals which i...
Database maintenance site:
Niigata University Graduate School of Medical and Dental Sciences
Organism(s) covered:
Description:
All known operons from numerous species have been collected from literature and other public databas...
Database maintenance site:
Pole Bioinformatique Lyonnais
Organism(s) covered:
Bacillus subtilis
Description:
NRsub is a database that contains information covering the whole genome of Bacillus subtilis.
This s...
Database maintenance site:
The State University of New Jersey
Organism(s) covered:
Description:
The Nucleic Acid Database Project (NDB) aims to collect and distribute information on nucleic acid s...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Triticum | Aegilops | Avena
Description:
KOMUGI is an integrated database of wheat managed by the National BioResource Project (NBRP)-Wheat. ...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Oryza
Description:
Oryzabase is an integrated database that collects information and resources related to rice strains....
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Oryzias
Description:
NBRP Medaka is a database for offering resources of Medaka (Oryzias latipes) maintained by National ...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Escherichia coli
Description:
NBRP E.coli Strain stocks mutants and clones of Escherichia coli to distribute to academic researche...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Chrysanthemum
Description:
NBRP Chrysanthemum provides resources of plants belonging to the genus Chrysanthemum and closely rel...
Database maintenance site:
NITE (National Institute of Technology and Evaluation)
Organism(s) covered:
Archaea | Bacteria | Fungi | Cyanobacteria | Glaucocystophyceae | ...
Description:
This is a site by which the culture catalogue of the Biological Resource Center of the National Inst...
Database maintenance site:
National Institute of Infectious Diseases
Organism(s) covered:
Mycoplasma penetrans
Description:
This is the database of the Mycoplasma penetrans genome project. Complete nucleotide sequence, prote...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
Database maintenance site:
Kyushu University
Organism(s) covered:
Ipomoea nil
Description:
National BioResource Project Morning glory collects resources of the Japanese morning glory (Ipomoea...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Mus musculus
Description:
MMDBJ is a database of mouse microsatellite loci to provide information about simple sequence length...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus
Description:
This database provides all information and resources involved in the sequencing of Lotus japonicus (...
Database maintenance site:
The University of Tokyo Atmosphere and Ocean Research Institute
Organism(s) covered:
Gnathostomata | Hyperoartia
Description:
MitoFish is a database for the fish mitochondrial genome, which allows users to find data from compl...
Database maintenance site:
Faculty of Life Sciences, The University of Manchester
Organism(s) covered:
Description:
miRBase is a database for published microRNA sequences and annotations, which include mature miRNA s...
Database maintenance site:
The Jackson Laboratory
Organism(s) covered:
Mus musculus
Description:
This is a comprehensive site for mouse research. The site contains detailed information on mouse gen...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus | Bos taurus
Description:
MGC is a full-length cDNA clone database for mammalian genes. It contains information such as gene n...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Archaea | Bacteria
Description:
The Microbial Genome Workbench (MG Workbench) is a database that enables research into the genomes o...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
This is a database of keywords representing the content of articles and biological information. The ...
Database maintenance site:
EMBL (European Molecular Biology Laboratory)
Organism(s) covered:
Oryzias latipes
Description:
This database includes information regarding gene expression patterns in medaka (Oryzias latipes), c...
Database maintenance site:
National Institute for Basic Biology
Organism(s) covered:
Archaea | Bacteria | Apicomplexa | Mycetozoa | Fungi | ...
Description:
MBGD is a database with a workbench system for comparative analysis of completely sequenced microbia...
Database maintenance site:
MaizeGDB (Maize Genetics and Genomoics Database) Working Group
Organism(s) covered:
Zea mays
Description:
MaizeGDB is a integrated database of the crop plant and model organism Zea mays. It contains maps, g...
Database maintenance site:
The University of Tokyo The Institute of Medical Science
Organism(s) covered:
Halocynthia roretzi
Description:
MAGEST is a database of newly identified maternal cDNAs of the ascidian Halocynthia roretzi to exami...
Database maintenance site:
Life Science Dictionary Project
Organism(s) covered:
Description:
LSD Project is a database of life science terms with free online devices for dictionaries and transl...
Database maintenance site:
The Japanese Conference on the Biochemistry of Lipids
Organism(s) covered:
Description:
Lipidbank is the official database of the Japanese Conference on the Biochemistry of Lipids (JCBL). ...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
The LinkDB database links information between hundreds of molecular biology databases. The database ...
Database maintenance site:
University of Miyazaki, Faculty of Agriculture
Organism(s) covered:
Lotus japonicus | Glycine max | Rhizobium
Description:
NBRP Legume Base is a database for offering research materials of two legume species; Lotus japonicu...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Oryza sativa
Description:
This site contains information on full-length cDNA from rice, classified into approximately 28,000 g...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
The KEGG SSDB (Sequence Similarity DataBase) organizes amino acid sequence similarities among all pr...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
The KEGG PATHWAY database has manually drawn pathway maps that represent molecular interaction and r...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
The KEGG LIGAND database is a composite consisting of COMPOUND, GLYCAN, REACTION, RPAIR, RCLASS, and...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Synechocystis sp. PCC 6803 | Bacillus subtilis | Escherichia coli str. K-12 substr. W3110 | Nostoc sp. PCC 7120 | Homo sapiens
Description:
The KEGG EXPRESSION database provides microarray gene expression profile data for Synechocystis PCC6...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
The KEGG BRITE database contains functional hierarchies and binary relationships of biological entit...
Database maintenance site:
The institute of medical science, The University of Tokyo
Organism(s) covered:
Homo sapiens
Description:
JSNP is a database consisting of common gene variations found in the Japanese population. In 2002, i...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Mus musculus | Rattus norvegicus
Description:
JMSR is constructed by the genetic Informatics Laboratory, National Institute of genetics (NIG) as a...
Database maintenance site:
Tokyo Metropolitan Geriatric Hospital and Institute of Gerontology
Organism(s) covered:
Homo sapiens
Description:
JG-SNP is a database for accurate medical information and SNPs associated with geriatric diseases. T...