List of Database Records (records: 2170)
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Database maintenance site:
Tokyo Institute of Technology Graduate School of Bioscience and Biotechnology
Organism(s) covered:
Escherichia coli O157:H7 str. Sakai
Description:
This database provides a comprehensive resource about the E. coli O157:H7 Sakai genome, including a ...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
eProtS is a dictionary about protein molecules that are particularly important for biology with imag...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Mus musculus
Description:
The ENU mutants allows users to find mutant mouse lines. The program has performed a large-scale mut...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
This search engine combs for information from over 30 major databases at NCBI, including PubMed, nuc...
Database maintenance site:
Wellcome Sanger Institute
Organism(s) covered:
Description:
ENSEMBL is a collection of automatically annotated genome databases for vertebrates and a number of ...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Description:
The European Nucleotide Archive (ENA) is a database that contains information about the structure an...
Database maintenance site:
Kumamoto University Institute of Resource Development and Analysis
Organism(s) covered:
Mus musculus
Description:
EGTC is a mouse gene trap resource which allows users to find information on cell lines and mice wit...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
eF-site is a database of molecular surfaces and electrostatic potentials for structures in the PDB t...
Database maintenance site:
NITE (National Institute of Technology and Evaluation)
Organism(s) covered:
Aeropyrum pernix K1 | Anaerolinea thermophila UNI-1 | Arthrospira platensis NIES-39 | Aspergillus oryzae RIB40 | Brevibacillus brevis NBRC 100599 | ...
Description:
This is a database containing genomic information of 29 microorganisms.
Sequencing of these microorg...
Database maintenance site:
University of California
Organism(s) covered:
Saccharomyces cerevisiae | Drosophila melanogaster | Escherichia coli | Caenorhabditis elegans | Homo sapiens | ...
Description:
The DIP is a database of experimentally determined interactions between proteins. It contains protei...
Database maintenance site:
Kyoto Institute of Technology Drosophila Genetic Resource Center
Organism(s) covered:
Drosophila
Description:
DGRC is the integrated retrieval system for Drosophila strains collected and maintained by NBRP 'Dro...
Database maintenance site:
Japan Atomic Energy Agency
Organism(s) covered:
Deinococcus
Description:
The DeinoBase database annotates open reading frames within the Deinococcus radiodurans genome to he...
Database maintenance site:
Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered:
All
Description:
DDBJ, which is organized by NIG (National Institute of genetics), is one of the three databanks that...
Database maintenance site:
The University of Tokyo The Institute of Medical Science Human Genome Center
Organism(s) covered:
Homo sapiens | Mus musculus | Plasmodium falciparum | Cyanidioschyzon merolae | Rattus norvegicus | ...
Description:
DBTSS provides precise positional information for transcription start sites (TSSs) of eukaryotic mRN...
Database maintenance site:
The University of Tokyo The Institute of Medical Science Human Genome Center
Organism(s) covered:
Ciona
Description:
DBTGR collects information on tunicate gene regulation, including experimental data, reported gene a...
Database maintenance site:
The University of Tokyo The Institute of Medical Science Human Genome Center
Organism(s) covered:
Bacillus subtilis
Description:
The DBTBS database consists of experimentally validated data for Bacillus subtilis regulated genes a...
Database maintenance site:
Kyushu University Medical Institute of Bioregulation
Organism(s) covered:
Homo sapiens
Description:
dbQSNP is a database of SNPs to help users characterize regulatory mechanisms of genes with medical ...
Database maintenance site:
National Institute of Radiological Sciences
Organism(s) covered:
Description:
dbProP is a database for supporting research on protein polymophisms. It provides information on ami...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
DBGET is an integrated system to help users search across an assemblage of major biological database...
Database maintenance site:
University of Manchester
Organism(s) covered:
Description:
PRINTS Version 42.0 is a collection of motifs called 'fingerprints', because they are applied to def...
Database maintenance site:
The University of Tokyo
Organism(s) covered:
Caenorhabditis elegans
Description:
This database comprises 168 Caenorhabditis elegans genes compiled to help users identify phenotypes ...
Database maintenance site:
The Centre for Applied Genomics
Organism(s) covered:
Homo sapiens
Description:
Database of Genomic Variants is a repository that provides information about variations in structure...
Database maintenance site:
Kyushu University Medical Institute of Bioregulation
Organism(s) covered:
Homo sapiens
Description:
D-HaploDB is a database of genome-wide definitive haplotypes that allows users to view SNP alleles, ...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Cyanobacteria
Description:
CYORF is an interactive community database that allows registered users to both access and annotate ...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Cyanobacteria
Description:
CyanoBase combines sequence data, NCBI taxonomy and KEGG genome information with social genome annot...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Bacteria | Eukaryota | Viruses
Description:
The Codon Usage Database is an extended web-based version of CUTG (Codon Usage Tabulated from GenBan...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Description:
M-CSA is a database about enzyme reaction. It provides annotation on the protein, catalytic residues...
Database maintenance site:
Max-Planck-Institut fur Entwicklungsbiologie
Organism(s) covered:
Description:
Suspend
CluSTr: Clusters of SWISS-PROT and TrEMBL proteins database
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Description:
Database maintenance site:
Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered:
Description:
CIBEX is a repository of gene expression data from microarray-based experiments measuring mRNA, SAGE...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Chlamydomonas reinhardtii
Description:
This database collects EST for Chlamydomonas reinhardtii, each with blastx analysis against the non-...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Description:
ChEBI is a collection of data on entities of biological interest.
This database concentrates on asse...
Database maintenance site:
Tokyo Medical and Dental University Medical Research Institute
Organism(s) covered:
Homo sapiens
Description:
The CGH Database is a portal of databases with thorough data on human genome aberrations and variati...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Homo sapiens
Description:
The CGED database comprises gene expression profile data and related clinical information for breast...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
This database seeks to identify a core set of human and mouse protein coding regions of high quality...
Database maintenance site:
Kumamoto University Institute of Resource Development and Analysis
Organism(s) covered:
Mus musculus
Description:
CARD (Center for Animal Resources and Development) R-BASE (Resource Database) is the database for cr...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Bacillus subtilis
Description:
BSORF is a repository for Bacillus subtilis genomic information from researchers in multiple countri...
Database maintenance site:
Technische Universitat Braunschweig
Organism(s) covered:
Gallus gallus | Bos taurus | Cervus elaphus | Canis | Danio rerio | ...
Description:
BRENDA is an extensive database of enzymes, which came online in January 2013.
As many as 5858 vario...
Suspend
Brain Atlas Database of Japanese Monkey for WWW.
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Homo sapiens | Macaca mulatta | Macaca fuscata
Description:
Database maintenance site:
The University of Tokyo
Organism(s) covered:
Bombyx mori
Description:
This photographic database contains images of mutant Bombyx mori larvae along with changes in larvae...
Database maintenance site:
The University of Tokyo The Institute of Medical Science Human Genome Center
Organism(s) covered:
Description:
Users can use the BioTermNet database to explore relationships between proteins, DNA, gene expressio...
Database maintenance site:
Kyushu Institute of Technology
Organism(s) covered:
Description:
This gallery uses high quality images of spatial models of nucleic acids, proteins and their complex...
Database maintenance site:
The Berkeley Drosophila Genome Project
Organism(s) covered:
Drosophila melanogaster
Description:
This is the website for the Berkeley Drosophila Genome Project, and has information about genomic se...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Hordeum vulgare
Description:
National BioResource Project (NBRP) BarleyDB includes information about the barley germplasm preserv...
Database maintenance site:
ATLAS
Organism(s) covered:
Description:
The Atlas of genetics and Cytogenetics in Oncology and Haematology is a database for genes, cytogene...
Database maintenance site:
National Research Institute of Brewing
Organism(s) covered:
Aspergillus oryzae
Description:
This database allows users to explore the gene expression of Aspergillus oryzae with different envir...
Suspend
ARTADE: ARabidopsis Tiling-Array-based Detection of Exons
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Arabidopsis thaliana
Description:
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Description:
ArrayExpress is a database of experiments related to the structure, function, evolution, and mapping...
Suspend
ARCHAIC: Archaebacterial Information Collection
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Pyrococcus sp. OT3 | Thermoplasma volcanium GSS1 | Archaeoglobus fulgidus
Description:
ARCHAIC stands for 'ARCHAebacterial Information Collection' is a database of analyzed archaebacteria...