List of Database Records (records: 2186)
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Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Description:
Kazusa Molecular Formula Searcher (MFSearcher) is a RESTful Web service that provides researchers wi...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus | Arabidopsis thaliana
Description:
This is a database of nucleotide sequences of ESTs, cDNAs and oligo DNA microarray probes for Lotus ...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus
Description:
FuLoJa stands for Lotus japonicus Full-length cDNA Databases and includes full-length cDNA sequences...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
SSBC is a database about structures and functions of proteins elucidated at "National Project on Pro...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus
Description:
This database contains 98838 EST and 3488 full-length cDNA sequences of Lotus. japonicus, a model le...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Description:
MS-MS Fragment Viewer is a metabolomics database of the LC-FT/ICR-MS measurements of authentic compo...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Arabidopsis thaliana | Solanum lycopersicum | Brassica oleracea var. capitata | Chlamydomonas reinhardtii | Dicksonia antarctica | ...
Description:
KomicMarket (Kazusa Omics Data Market) is a database that contains annotations of metabolite peaks t...
Database maintenance site:
University of Alberta/Department of Computing Science
Organism(s) covered:
Description:
DrugBank is a database of detailed informatics resources on approved and experimental drugs. The dat...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Mus musculus
Description:
The Animal Resource Bank collects and provides mouse models of human disease (lysosomal disease mode...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Homo sapiens | Mus musculus | Pan troglodytes | Macaca fascicularis
Description:
JCRB gene Bank (Japanese Collection of Research Bioresources) provides research resources to worldwi...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Homo sapiens | Rattus | Mus musculus | Oryctolagus cuniculus | Cricetinae | ...
Description:
Medical Bioresource Database (MBRDB) is a database of localization and availability of biospecimens ...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Homo sapiens
Description:
Rare Disease Bank was established by the Ministry of Health, Labour and Welfare, Japan in 2009. The ...
Inactive
Open TG-GATEs
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Homo sapiens | Rattus norvegicus
Description:
Open TG-GATES is a toxicogenomics database. It stores gene expression data from rat liver and kidney...
Database maintenance site:
Kyushu University Faculty of Agriculture
Organism(s) covered:
Hexapoda
Description:
ELKUType is a database of information on type specimens preserved in the Entomological Laboratory, K...
Database maintenance site:
Kyushu University Faculty of Agriculture
Organism(s) covered:
Apis mellifera
Description:
HANABACHI is an image database covering all the species of the Japanese bees. The data on family And...
TOBIKOBACHI
Database maintenance site:
Kyushu University Faculty of Agriculture
Organism(s) covered:
Encyrtidae
Description:
TOBIKOBACHI is the image database of Japanese encyrtid wasps based on the collection of Dr. Tetsusab...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Acacia mangium | Arabidopsis thaliana | Cosmos bipinnatus | Dicksonia antarctica | Escherichia coli | ...
Description:
MassBase is a fundamental archive of mass spectral tags (MST) for metabolomics. It includes both kno...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Description:
This database of THz spectroscopic measurements of several biologically relevant compounds contains ...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Mus musculus
Description:
TFdb is a database of mouse transcription factors. The database contains information on known transc...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Rattus norvegicus
Description:
Rat Strain List is a database of rat resources maintained by RIKEN BioResource Center (RIKEN BRC). E...
Closed
RPOPDB: RIKEN Populus Database
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Populus
Description:
RPOPDB is a Populus genome sequence resource with genome browser and search functions to explore the...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Manihot esculenta
Description:
This is a database of cassava cDNA clones with 5' and 3' sequence information for each clone. Users ...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Arabidopsis thaliana | Physcomitrella patens | Manihot esculenta | Populus | Nicotiana tabacum | ...
Description:
This is a tool for BLAST searching multiple plant species. The website contains a sequence input win...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Description:
JCM is a database of cultured microbial strains and their genomic DNA samples maintained by RIKEN Bi...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Homo sapiens | Rattus norvegicus | Mus musculus | Macaca fuscata | Pan troglodytes
Description:
RIKEN BRC DNA BANK is a database of cloned DNA, vector and recombinant adenovirus resources maintain...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus | Cricetulus griseus | Mesocricetus auratus | ...
Description:
Cell Search System is a database of cultured cell lines derived from animal and human tissues mainta...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Arabidopsis thaliana
Description:
Arabidopsis activation (T-DNA)-tagged lines is a database of T-DNA-tagged Arabidopsis plants maintai...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Arabidopsis thaliana
Description:
This database of Arabidopsis mutant lines contains several hundred mutant T1 lines with visible phen...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Mus musculus
Description:
RIKEN ENU-based gene-driven mutagenesis is a collection of information on the ENU-based gene-driven ...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Viruses
Description:
RVD is a database of sequence and functional information about recombinant viruses generated, in par...
Closed
PRIMe - Standard Spectrum Search: Platform for RIKEN Metabolomics - Standard Spectrum Search
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Description:
Standard Spectrum Search is a database of metabolite NMR spectra. The database consists of dozens of...
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Description:
SpinAssign is a tool for annotating 2D 13C-HSQC NMR peaks. The site allows users to input peaks that...
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Description:
New Natural Compounds purified in RIKEN is a database of new compounds isolated from microorganisms ...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Arabidopsis thaliana | Oryza sativa | Solanum lycopersicum | Lotus japonicus | Glycine max | ...
Description:
This web-based tool, KaPPA-View4, represents -omics data on plant metabolic pathway maps that users ...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Bos taurus | Felis catus | Gallus gallus | Pan troglodytes | Canis lupus familiaris | ...
Description:
The JCRB Cell Bank database organizes information for distribution of cell cultures. Information is ...
Database maintenance site:
National Human Genome Research Institute, National Institute of Health
Organism(s) covered:
Vertebrata
Description:
Histone Database is a resource for sequences and properties of histones and related proteins. The da...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Description:
This database is named HATODAS, meaning Heavy-ATOm DAtabase System. The purpose is to assist the res...
Database maintenance site:
The University of Tokyo Graduate School of Arts and Sciences
Organism(s) covered:
Embryophyta | Bacteria | Metazoa | Fungi
Description:
Gclust is a database of homologous proteins across organisms. It contains protein homology informati...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
fRNAdb is a sequence database hosting a large collection of non-coding RNA sequence data that were o...
DJI: Dictionary of Japanese Insect Names
Database maintenance site:
Kyushu University Faculty of Agriculture
Organism(s) covered:
Hexapoda
Description:
DJI is a database of Japanese insects names treating all the insect species or subspecies recorded f...
Database maintenance site:
RIKEN PSC (RIKEN Plant Science Center)
Organism(s) covered:
Arabidopsis thaliana
Description:
This is a database of Arabidopsis proteins targeted to chloroplasts initially identified by in silic...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Description:
This is a database of new biomarker candidates based on relationships between biomarker candidates a...
Database maintenance site:
Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered:
Description:
ARSA is a database with a high-speed retrieval system of sequence and annotation data maintained by ...
Database maintenance site:
LANL (Los Alamos National Laboratory)
Organism(s) covered:
Chlamydophila pneumoniae | Chlamydia trachomatis | Haemophilus ducreyi | Mycoplasma genitalium | Neisseria gonorrhoeae | ...
Description:
This database contains molecular sequence information on papillomaviruses and related cellular prote...
Database maintenance site:
The Mass Spectrometry Society of Japan
Organism(s) covered:
Description:
MassBank is a high-resolution mass spectral database that involves the JST-BIRD project, and was dev...
HIV Structural Database and Chem-BLAST
Database maintenance site:
National Institute of Standards and Technology
Organism(s) covered:
Human immunodeficiency virus | Homo sapiens
Description:
Chem-BLAST provides information of similar chemicals in terms of structure, using data of PDB and Pu...
Suspend
Flytrap
Database maintenance site:
The University of Edinburgh
Organism(s) covered:
Drosophila melanogaster
Description:
Flytrap is an HTML-based repository on gene expression. This database provides information on gene e...
Database maintenance site:
Keio University
Organism(s) covered:
Ciona intestinalis
Description:
FABA is a database of the developmental stages of Ciona intestinalis, with 3D images taken at critic...
TABR: Tropical bee reference database
Database maintenance site:
Kyushu University Faculty of Agriculture
Organism(s) covered:
Apoidea
Description:
TABR is a reference database of tropical asian bees. A taxon is treated as one record in this databa...
Database maintenance site:
Kyoto Institute of Technology Drosophila Genetic Resource Center
Organism(s) covered:
Drosophila melanogaster
Description:
GETDB is a collection of information of Gal4 enhancer trap lines in D. melanogaster. The database co...