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Server update on March 19, 2025.
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List of Database Records (records: 2170)
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Database maintenance site:
GBIF (Global Biodiversity Information Facility), SiB Colombia
Organism(s) covered:
All
Description:
The Colombian Biodiversity Information System (SiB Colombia) maintains this data repository, built u...
Database maintenance site:
Canadensys, Universite de Montreal Biodiversity Centre, GBIF (Global Biodiversity Information Facility)
Organism(s) covered:
All
Description:
Canadensys maintains this data repository, built using an installation of the GBIF Integrated Publis...
Database maintenance site:
GBIF (Global Biodiversity Information Facility), Atlas of Living Australia
Organism(s) covered:
All
Description:
The Atlas of Living Australia (GBIF Australia) maintains this data repository in collaboration with ...
Database maintenance site:
He Group, University of Michigan Medical School
Organism(s) covered:
All
Description:
A linked data server designed for ontologies. Ontobee is aimed to facilitate ontology data sharing, ...
Database maintenance site:
GBIF (Global Biodiversity Information Facility in Spain), GBIF (Global Biodiversity Information Facility, Copenhagen, Denmark)
Organism(s) covered:
All
Description:
GBIF Spain maintains this data repository, built using an installation of the GBIF Integrated Publis...
Database maintenance site:
FlyBase administrators, MRC Human Genetics Unit, University of Edinburgh, LMB (MRC Laboratory of Molecular Biology), University of Cambridge, University of Edinburgh
Organism(s) covered:
Drosophila melanogaster
Description:
VFB is an interactive tool for neurobiologists to explore the detailed neuroanatomy, neuron connecti...
Database maintenance site:
Organism(s) covered:
All
Description:
MorphoBank provides a digital archive of biodiversity and evolutionary research data, specifically s...
Database maintenance site:
Weizmann Institute of Science
Organism(s) covered:
Homo sapiens
Description:
The MalaCards human disease database (http://www. malacards.org/) is an integrated compendium of ann...
Database maintenance site:
BioGen, Wellcome Sanger Institute
Organism(s) covered:
Homo sapiens
Description:
Open Targets designed and developed an integration and visualization platform that provides evidence...
Database maintenance site:
Organism(s) covered:
Ascomycota | Basidiomycota | Blastocladiomycota | Chytridiomycota | Fungi | ...
Description:
The Face Of Fungi database allows deposition of taxonomic data, phenotypic details and other useful ...
Database maintenance site:
Biozentrum, University of Basel
Organism(s) covered:
Caulobacter crescentus | Neisseria meningitidis | Streptomyces coelicolor | Streptomyces granaticolor
Description:
Proteomics database for streptomyces and caulobacter and neisseria. Unique database in the field, co...
Database maintenance site:
Organism(s) covered:
Hepatitis C virus
Description:
HCVIVdb is a database of published variations observed within the internal ribosome entry site (IRES...
Database maintenance site:
IOCB (Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences)
Organism(s) covered:
All
Description:
The Benchmark Energy & Geometry Database (BEGDB) collects results of highly accurate QM calculations...
Database maintenance site:
European Commission FP7, Icahn School of Medicine at Mount Sinai, UNM School of Medicine, University of Miami School of Medicine
Organism(s) covered:
Homo sapiens
Description:
TCRD is the central resource behind the Illuminating the Druggable Genome Knowledge Management Cente...
Database maintenance site:
UNM School of Medicine
Organism(s) covered:
Bacteria | Viruses
Description:
DrugCentral is online drug information that provides information on active ingredients, chemical ent...
Database maintenance site:
CONCERT-European Joint Programme for the Integration of Radiation Protection Research
Organism(s) covered:
Canis familiaris | Drosophila | Homo sapiens | Mus musculus | Rattus norvegicus
Description:
STOREDB provides infrastructure for sharing data and resources in radiation biology and epidemiology...
Database maintenance site:
CIRAD (International Cooperation Center for Agricultural Research for Development), Bioversity International, South Green
Organism(s) covered:
Musa
Description:
The Banana Genome Hub is the official portal for the Musaceae genome resources.
Database maintenance site:
Bioversity International
Organism(s) covered:
Musa
Description:
The Musa Germplasm Information System (MGIS) contains key information on Musa germplasm diversity, i...
Database maintenance site:
Wenzhou Medical University
Organism(s) covered:
Homo sapiens
Description:
mirDNMR is a database for the collection of gene-centered background DNMRs obtained from different m...
Database maintenance site:
CERN (European Organisation for Nuclear Research)
Organism(s) covered:
All
Description:
Generalist research data repository built and developed by OpenAIRE and CERN, to ensure that everyon...
Database maintenance site:
CeNT (Interdisciplinary Laboratory of Biological Systems Modelling, Center of New Technology)
Organism(s) covered:
All
Description:
LinkProt collects information about protein chains and complexes that form links. LinkProt detects d...
Database maintenance site:
REFLORA Programme
Organism(s) covered:
Chlorophyta | Phaeophyceae | Rhodophyta | Fungi | Viridiplantae
Description:
Reflora Virtual Herbarium is a virtual herbarium for images of Brazilian plants housed in foreign he...
Database maintenance site:
Quantitative and Computational Biology Group, Max Planck Institute for Biophysical Chemistry
Organism(s) covered:
All
Description:
Proteome-pI is an online database containing information about predicted isoelectric points for 5,02...
Database maintenance site:
REFLORA Programme
Organism(s) covered:
Chlorophyta | Phaeophyceae | Rhodophyta | Fungi | Viridiplantae
Description:
In 2010, Brazil published the Catalog of Plants and Fungi of Brazil and launched the first online ve...
Database maintenance site:
Ben-Gurion University of the Negev
Organism(s) covered:
Homo sapiens
Description:
Knowledge of the molecular interactions of human proteins within tissues is important for identifyin...
Database maintenance site:
Organism(s) covered:
All
Description:
Dolce is a database of DNA structure motifs based on an automatic classification method consisting o...
Database maintenance site:
CALIPHO (Computer and Laboratory Investigation of Proteins of Human Origin Group, Swiss Institute of Bioinformatics)
Organism(s) covered:
Insecta | Acari | Vertebrata
Description:
The Cellosaurus is a knowledge resource on cell lines. It attempts to describe all cell lines used i...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
GPnotebook is a concise synopsis of the entire field of clinical medicine focused on the needs of th...
Database maintenance site:
Edwards Group, University of Western Australia, The University of Queensland
Organism(s) covered:
Cicer arietinum
Description:
This resource contains genome and gene sequences, features and isolationed chromosome alignments, wh...
Database maintenance site:
ANDS (Australian National Data Service), Edwards Group, University of Western Australia
Organism(s) covered:
Hordeum vulgare | Oryza sativa | Triticum aestivum | Zea mays
Description:
The compendium of crop Proteins with Annotated Locations (cropPAL) collates more than 550 data sets ...
Database maintenance site:
QUT (Queensland University of Technology)
Organism(s) covered:
Musa | Musa acuminata | Musa balbisiana
Description:
The vast majority of the bananas currently grown and consumed were not conventionally bred but are s...
Database maintenance site:
ANDS (Australian National Data Service), James Cook University
Organism(s) covered:
All
Description:
The Tropical Data Hub (TDH) is an open portal enabling researchers to submit information relating to...
Database maintenance site:
Central European Institute of Technology
Organism(s) covered:
All
Description:
ValidatorDB is a collection of validation results for the entire Protein Data Bank. Annotation (3-le...
Database maintenance site:
The University of North Carolina, Chapel Hill Eshelman School of Pharmacy
Organism(s) covered:
Description:
The Chemical Probes Portal is an online open access catalog of annotated small molecule inhibitors, ...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
denovo-db is a collection of germline de novo variants identified in the human genome. de novo varia...
Database maintenance site:
Organism(s) covered:
All
Description:
A database for storing MultiCellDS files. In the future, MultiCellDB will include a curated library ...
Database maintenance site:
Organism(s) covered:
All
Description:
DataMed is a prototype biomedical data search engine. Its goal is to discover data sets across data ...
Database maintenance site:
Bioconductor
Organism(s) covered:
All
Description:
Bioconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioc...
Database maintenance site:
Bodleian Library, University of Oxford
Organism(s) covered:
All
Description:
The Oxford University Research Archive (ORA) serves as an institutional repository for the Universit...
Database maintenance site:
NIRRH (National Institute for Research in Reproductive Health)
Organism(s) covered:
Description:
CAMPR3 (Collection of Anti-Microbial Peptides) has been generated to enhance research into AMP famil...
Database maintenance site:
LIC (Life Imaging Center, University of Freiburg)
Organism(s) covered:
Danio rerio
Description:
ViBE-Z, the Virtual Brain Explorer for Zebrafish is an imaging and image analysis framework for virt...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
The core of the system is tailored PACS (Picture Archiving and Communication System). It forms the b...
Database maintenance site:
Centre for Cell Imaging, Institute of Integrative Biology, University of Liverpool
Organism(s) covered:
All
Description:
A repository of image / SPM data to support users of the Centre for Cell Imaging, University of Live...
Database maintenance site:
IGC (Instituto Gulbenkian de Ciencia)
Organism(s) covered:
All
Description:
Haeckaliens is a collection of 3D datasets and reconstructions of embryos obtained with the open-sou...
Database maintenance site:
Sage Bionetworks
Organism(s) covered:
All
Description:
Synapse is a collaborative research platform that allows individuals and teams to share, track, and ...
Database maintenance site:
School of Clinical Medicine, University of Cambridge
Organism(s) covered:
Homo sapiens
Description:
The Mammographic Image Analysis Society database of digital mammograms contains 322 images (161 pair...
Database maintenance site:
Organism(s) covered:
Caenorhabditis elegans | Cricetulus griseus | Drosophila | Homo sapiens | Mus musculus
Description:
The Broad Bioimage Benchmark Collection (BBBC) is a collection of freely downloadable microscopy ima...
Database maintenance site:
UNESCO UNITWIN CS-DC
Organism(s) covered:
Branchiostoma lanceolatum | Danio rerio | Oryctolagus cuniculus | Paracentrotus lividus | Sphaerechinus granularis | ...
Description:
Webservice for 3D+time in vivo, in toto imaging data storage and annotation. Direct access to image ...
Database maintenance site:
The University of Adelaide (TERN Eco-informatics)
Organism(s) covered:
Animalia | Viridiplantae
Description:
The Advanced Ecological Knowledge and Observation System from the Terrestrial Ecosystem Research Net...
Database maintenance site:
BioImage Informatics, IPDM, France Bio-Imaging, Institut Curie, Strand Avadis
Organism(s) covered:
Aedes aegypti | Drosophila | Homo sapiens | Mus musculus | Saccharomyces
Description:
In addition to data used in on-going collaborations, this database host images from France Bio Imagi...