Notice：Temporary Service Outage
for All Services on the “biosciencedbc.jp” and “integbio.jp” Domains
(Saturday, January 17, 2026, 20:30～21:00) https://biosciencedbc.jp/news/20260107-02.html |
List of Database Records (records: 2182)
Sort by:
Organism covered
Category
Operational Status
Region
Others
Database maintenance site:
MNHN (Muséum National d'Histoire Naturelle)
Organism(s) covered:
Fulgoroidea | Fulgoromorpha | Hemiptera | Insecta
Description:
Fulgoromorpha Lists On the Web (FLOW) is an online database that aims to provide an easy-access summ...
Database maintenance site:
MVZ (Museum of Vertebrate Zoology at Berkeley), University of Colorado Boulder
Organism(s) covered:
All
Description:
VertNet is a NSF-funded collaborative project that makes biodiversity data free and available on the...
Database maintenance site:
INI (The USC Mark and Mary Stevens Neuroimaging and Informatics Institute, University of Southern California)
Organism(s) covered:
Homo sapiens
Description:
The LONI Image Data Archive (IDA) is a user-friendly environment for archiving, searching, sharing, ...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
The immune tolerance data management and visualization portal for studies sponsored by the Immune To...
Database maintenance site:
CEDAR (Center for Expanded Data Annotation and Retrieval), Human Immunology Project Consortium, ISA-Tools, University of Oxford, Northrop Grumman Health IT, Stanford University, Technion - Israel Institute of Technology, University at Buffalo, University of California San Francisco, AMP (Accelerating Medicines Partnership)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
The Immunology Database and Analysis Portal (ImmPort) data repository was created for the exploratio...
Database maintenance site:
MGI (Mouse Genome Informatics)
Organism(s) covered:
Mus musculus
Description:
The Gene Expression Database (GXD) is a community resource for gene expression information from the ...
Database maintenance site:
Organism(s) covered:
Caenorhabditis elegans | Drosophila melanogaster | Felis catus | Homo sapiens | Macaca mulatta | ...
Description:
Open Connectome Project: Reverse Engineering the Brain One Synapse at a Time
Database maintenance site:
University of Michigan
Organism(s) covered:
Archaea | Bacteria
Description:
The ribosomal RNA operon copy number database is a publicly available, curated resource for ribosoma...
Database maintenance site:
COS (Center for Open Science)
Organism(s) covered:
All
Description:
The Open Science Framework (OSF) is a free and open free, open repository and platform to enable col...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
DEPOD - the human DEPhOsphorylation Database is a manually curated database collecting human active ...
Database maintenance site:
BioComputing laboratory, University of Padua, Institue of Molecular Biology, gGmbH, Structural Bioinformatics and Molecular Modelling Group, CRBM
Organism(s) covered:
All
Description:
RepeatsDB (http://repeatsdb.bio.unipd.it/) is a database of annotated tandem repeat protein structur...
Database maintenance site:
University of Padova
Organism(s) covered:
All
Description:
MobiDB is a database of intrinsically disordered regions (IDRs) and related features from various so...
Database maintenance site:
LINK-group, NetBiol, Semmelweis University
Organism(s) covered:
Caenorhabditis elegans | Drosophila melanogaster | Homo sapiens | Saccharomyces cerevisiae
Description:
The compartmentalized protein-protein interaction database (ComPPI), provides qualitative informatio...
Database maintenance site:
CPqRR (Fiocruz Minas Centro de Pesquisas Rene Rachou), St Vincent's Institute, Department of Biochemistry, University of Cambridge
Organism(s) covered:
All
Description:
Platinum is a manually curated, literature-derived database comprising over 1,000 mutations which fo...
Database maintenance site:
University of Warsaw
Organism(s) covered:
All
Description:
KnotProt collects information about proteins with knots or slipknots. The knotting complexity of pro...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
euL1db, the European database of L1-HS retrotransposon insertions in humans, provides a curated and ...
Database maintenance site:
Organism(s) covered:
Description:
Bio2RDF is an open-source project that uses Semantic Web technologies to build and provide the large...
Suspend
Nuclear Receptor Signaling Atlas: NURSA
Database maintenance site:
Baylor College of Medicine
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus
Description:
The mission of NURSA is to accrue, develop, and communicate information that advances our understand...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
Open Source Brain is a resource for sharing and collaboratively developing computational models of n...
Database maintenance site:
Cambridge Systems Biology Centre, University of Cambridge, MGI (Mouse Genome Informatics)
Organism(s) covered:
Mus musculus
Description:
A database of integrated mouse data from MGI, powered by InterMine. MouseMine is member of InterMOD,...
Database maintenance site:
Cambridge Systems Biology Centre, University of Cambridge
Organism(s) covered:
Anopheles gambiae | Caenorhabditis elegans | Drosophila melanogaster
Description:
FlyMine is an integrated database of genomic, expression and protein data for Drosophila, Anopheles ...
Database maintenance site:
NIH (National Institutes of Health)
Organism(s) covered:
Mus musculus
Description:
The Candidate Cancer Gene Database (CCGD) was developed to disseminate the results of transposon-bas...
Database maintenance site:
Organism(s) covered:
All
Description:
The Environmental Data Initiative is an NSF-funded project meant to accelerate curation and archive ...
Database maintenance site:
Pasteur Institute of Morocco
Organism(s) covered:
Homo sapiens
Description:
The Moroccan Genetic Disease Database (MGDD) collect and document mutations and frequencies of polym...
Database maintenance site:
Organism(s) covered:
All
Description:
KiMoSys is a user-friendly platform that includes a public data repository of relevant published mea...
Database maintenance site:
Organism(s) covered:
Bos taurus | Danio rerio | Drosophila melanogaster | Homo sapiens | Mus musculus | ...
Description:
The ESTs and mRNAs from GenBank have been used to identify chimeric RNAs of two or more different ge...
Database maintenance site:
DataONE, NCEAS (National Center for Ecological Analysis and Synthesis)
Organism(s) covered:
All
Description:
The Knowledge Network for Biocomplexity (KNB) is an international repository intended to facilitate ...
Database maintenance site:
GEUVADIS (Genetic European Variation in Disease), CIPF (Principe Felipe Research Centre Computational Genomics Department), EMBL-EBI (European Bioinformatics Institute), EMBL (European Molecular Biology Laboratory)
Organism(s) covered:
All
Description:
The European Variation Archive is an open-access archive that accepts submission of, and provides ac...
Database maintenance site:
Organism(s) covered:
All
Description:
SciCrunch resource registry is the new name of the NIF registry. SciCrunch is a data sharing and dis...
Database maintenance site:
NIH Blueprint (National Institutes of Health Blueprint for Neuroscience Research), NKI (Nathan S. Kline Institute for Psychiatric Research)
Organism(s) covered:
Homo sapiens
Description:
Database for open data sharing of resting-state fMRI and DTI images collected from over 50 sites aro...
Database maintenance site:
NERSC (National Energy Research Scientific Computing Center), Uppsala University
Organism(s) covered:
All
Description:
The Coherent X-ray Imaging Data Bank (CXIDB) offers scientists from all over the world a unique oppo...
Database maintenance site:
INCF (International Neuroinformatics Coordinating Facility ), Max Planck Institute for Human Cognitive and Brain Sciences, Stanford Digital Library, Stanford University
Organism(s) covered:
Homo sapiens
Description:
The purpose of this database is to collect and distribute statistical maps of the human brain. Such ...
Database maintenance site:
Organism(s) covered:
Mus musculus
Description:
MONOCLdb is an integrative and interactive database designed to retrieve and visualize annotations a...
Database maintenance site:
Laura and John Arnold Foundation, Stanford University, NIH (National Institutes of Health)
Organism(s) covered:
Homo sapiens
Description:
The OpenNeuro project (formerly known as the OpenfMRI project) was established in 2010 to provide a ...
Database maintenance site:
University of Delhi
Organism(s) covered:
Oryza sativa
Description:
The Manually Curated Database of Rice Proteins (MCDRP) is a manually-curated database based on publi...
Database maintenance site:
IBI (Integrative Biomedical Informatics Group, Research Programme on Biomedical Informatics (GRIB) IMIM-UPF)
Organism(s) covered:
Homo sapiens
Description:
DisGeNET is a discovery platform containing one of the largest collections available of genes and va...
Database maintenance site:
University of Maryland
Organism(s) covered:
Bacteria
Description:
CollecTF is a database of transcription factor binding sites (TFBS) in the Bacteria domain. It aims ...
Database maintenance site:
Open Microscopy Environment
Organism(s) covered:
All
Description:
OMERO is client-server software for visualization, management and analysis of biological microscope ...
Database maintenance site:
CNB (National Centre for Biotechnolgy)
Organism(s) covered:
Drosophila melanogaster | Homo sapiens
Description:
CentrosomeDB is a collection of human and drosophila centrosomal genes that were reported in the lit...
Database maintenance site:
UCSF (Laboratory of Andrej Sali, University of California at San Francisco)
Organism(s) covered:
All
Description:
ModBase (http://salilab.org/modbase) is a database of annotated comparative protein structure models...
Database maintenance site:
CiteAB, STORM Consultancy
Organism(s) covered:
All | Mus musculus | Xenopus
Description:
CiteAb is the largest citation-ranked antibody search engine and provides a simple way to find antib...
Database maintenance site:
Organism(s) covered:
Description:
GeneProf Data is an open web resource for analysed functional genomics experiments. We have built up...
Database maintenance site:
Michael Baudis Group, Institute of Molecular Life Sciences, SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:
Homo sapiens
Description:
Part of the Progenetix project, the arrayMap database facilitates the study of the genetics of human...
Database maintenance site:
Michael Baudis Group, Institute of Molecular Life Sciences
Organism(s) covered:
Homo sapiens
Description:
The Progenetix database provides an overview of copy number abnormalities in human cancer from Compa...
Database maintenance site:
Organism(s) covered:
Description:
The JCB DataViewer is an image hosting and visualization platform for original microscopy image data...
Database maintenance site:
University of Porto
Organism(s) covered:
Caenorhabditis elegans | Drosophila melanogaster | Homo sapiens | Macaca mulatta | Mus musculus | ...
Description:
A comprehensive on-line resource with curated datasets of mitochondrial DNA (mtDNA) rearrangements.
Database maintenance site:
University of Missouri
Organism(s) covered:
Glycine max
Description:
Soybean Knowledge Base (SoyKB), is a comprehensive all-inclusive web resource developed for soybean ...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
All | Anopheles gambiae | Arabidopsis thaliana | Bos indicus | Bos taurus | ...
Description:
EBI Metagenomics has changed its name to MGnify to reflect a change in scope. This is a free-to-use ...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute), ISB (Institute for Systems Biology), UCSD (University of California San Diego), National Center for Protein Sciences, University of Washington
Organism(s) covered:
All
Description:
The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteom...
Database maintenance site:
GigaScience/BGI HK Ltd
Organism(s) covered:
All
Description:
GigaDB primarily serves as a repository to host data and tools associated with articles in GigaScien...