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List of Database Records (records: 2182)
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Organism covered
Category
Operational Status
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Database maintenance site:
Japan Monkey Centre
Organism(s) covered:
Primates
Description:
CaPriCo is a database of specimens in the captive Primate collection at Japan Monkey Centre. It cont...
Database maintenance site:
JT Biohistory Research Hall
Organism(s) covered:
Parasteatoda tepidariorum
Description:
Pt_spiderBASE is a database for ESTs of the spider Parasteatoda tepidariorum, a model arthropod to s...
Database maintenance site:
Keio University
Organism(s) covered:
Mus musculus
Description:
MMMDB is a freely available database containing a collection of metabolites measured from multiple t...
Database maintenance site:
Tokyo Metropolitan Institute of Medical Science
Organism(s) covered:
Callithrix jacchus
Description:
This database is a collection of section images from the brain and spinal cord of the common marmose...
Database maintenance site:
Research Institute for Sustainable Humanosphere, Kyoto University
Organism(s) covered:
Sophora flavescens | Lithospermum erythrorhizon
Description:
This Plant gene Database contains plant gene information focusing on the secondary metabolism and th...
Inactive
SDOP-DB: a database for international sharing of mouse phenotyping protocols
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Mus musculus
Description:
SDOP-DB is a comparative standardised-protocol database for the integration and sharing of mouse phe...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Mus musculus
Description:
Pheno-Pub provides information of mouse phenotyping analysis. It contains results of the mouse pheno...
Database maintenance site:
DBCLS(Database Center for Life Science)
Organism(s) covered:
All
Description:
This is a portal site that integrates life science databases in RDF format. The portal is a data por...
Database maintenance site:
Tokai University School of Medicine
Organism(s) covered:
Homo sapiens
Description:
VaDE is a database of human genome polymorphisms involved in traits such as various disease suscepti...
Database maintenance site:
Ehime University Center for Marine Environmental Studies
Organism(s) covered:
Metazoa
Description:
es-BANK is a collection of environmental specimens collected from all over the world and stored at E...
Database maintenance site:
National Institute for Basic Biology
Organism(s) covered:
Bacteria | Archaea | Apicomplexa | Fungi | Chordata | ...
Description:
MBGD SPARQL Search is a search tool for the Microbial Genome Database for Comparative Analysis (MBGD...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
PDB/RDF is a collection of PDB data in the Resource Description Framework (RDF) format. Users can se...
Database maintenance site:
NCBO (The National Center for Biomedical Ontology)
Organism(s) covered:
Bacteria
Description:
MCCV collects structured controlled vocabulary for describing meta information of microbial culture ...
Database maintenance site:
GlyTouCan Project Team
Organism(s) covered:
Description:
GlyTouCan is an international repository of glycan structures. This database contains uncurated glyc...
Database maintenance site:
The Noguchi Institute, RIKEN (The Institute of Physical and Chemical Research), AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
GlycoNMR is a database of NMR analysis of glycan. Each record contains information about structure, ...
Database maintenance site:
Kyushu University, AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Caenorhabditis elegans
Description:
CGGDB is a database of glycogenes of C. elegans. It consists of gene list, Expression and Phenotype ...
Database maintenance site:
Tohoku Medical Megabank Organization,Tohoku University
Organism(s) covered:
Homo sapiens
Description:
iJGVD is a database about genome variation in the Japanese population. This database provides data o...
Database maintenance site:
JST (Japan Science and Technology Agency)
Organism(s) covered:
Description:
NikkajiWeb is a search service of the "Japan Chemical Substance Dictionary (Nikkaji)", an organic co...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Brachypodium distachyon
Description:
BRACHYPEDIA is a photo library about growth stages of Brachypodium distachyon. Each entry contains p...
Database maintenance site:
Keio University School of Medicine
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
SKIP is operated by Keio University of School of Medicine as an embodiment of the Human Stem Cells I...
Database maintenance site:
Macquarie University
Organism(s) covered:
Description:
UniCarbKB is a knowledge database of glycan structures of glycoproteins. It provides comprehensive i...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Brachypodium distachyon
Description:
RBFL BD is a comprehensive collection of full-length cDNAs from Brachypodium distachyon. It provides...
Database maintenance site:
Society for Actinomycetes Japan
Organism(s) covered:
Actinobacteria
Description:
Digital Atlas of Actinomycetes 2 is a collection of micrographs and annotations about Actinomycetes....
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Homo sapiens
Description:
This is a database collecting sensory characteristics of vision, hearing, and touch measured by Nati...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Arabidopsis thaliana
Description:
ARTADE2DB is a database that integrates not only the information predicted by Dynamic-Structure-base...
Database maintenance site:
Tohoku Medical Megabank Organization,Tohoku University
Organism(s) covered:
Homo sapiens
Description:
jMorp is a database of metabolome and proteome data in plasma obtained from about 500 healthy volunt...
Database maintenance site:
Tokai University School of Medicine
Organism(s) covered:
Mammaliia
Description:
gEVE database provides comprehensive datasets of sequences, genomic loci and functional annotations ...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
The SDBS database consists of of sensory characteristics of vision, hearing, and touch measured by N...
Database maintenance site:
RCSB PDB
Organism(s) covered:
Description:
The RCSB PDB Molecule of the Month is a database of short accounts on selected molecules from the Pr...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Homo sapiens
Description:
ClinVar is a freely available archive describing relationships between medically important variants ...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research) Harima Institute
Organism(s) covered:
Thermus thermopiles HB8
Description:
WCPDB is a database of functional proteins from an extremely thermophilic bacterium, Thermus thermop...
Database maintenance site:
Center for Computational Regulatory Genomics, Beckman Institute
Organism(s) covered:
Echinodermata
Description:
Echinobase is a comparative genomics platform for the echinoderm clade. It contains information on g...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Mammalia | Bacteria | Arabidopsis thaliana
Description:
J-phenome is a portal for phenotype databases of model organisms, in cooperation with various Japane...
Database maintenance site:
National Cancer Center
Organism(s) covered:
Homo sapiens
Description:
The Integrative Disease Omics Database has been constructed through a project named "Comprehensive e...
Database maintenance site:
OriDB.org
Organism(s) covered:
Schizosaccharomyces pombe
Description:
S. pombe OriDB is a database providing a catalogue of confirmed and predicted DNA replication origin...
Database maintenance site:
OriDB.org
Organism(s) covered:
Saccharomyces cerevisiae
Description:
S. cerevisiae OriDB is a database providing a catalogue of confirmed and predicted DNA replication o...
Suspend
Transcriptional Regulation Portal
Database maintenance site:
Kyushu Institute of Technology
Organism(s) covered:
Bacteria | Archaea | Eukaryota
Description:
TRP is a portal collecting databases and analysis tools related to transcriptional regulation resear...
Database maintenance site:
Hosei Science Center, Italian-Japanese Biological Society and Stazione Zoologica di Napoli
Organism(s) covered:
Metazoa | Dinophyceae | Rhizaria
Description:
Zoological Collection @ Stazione Zoologica 'Anton Dohrn' di Napoli (SZN) is a database about zoolog...
Database maintenance site:
Nagasaki University Library
Organism(s) covered:
Streptophyta | Fungi | Mammalia | Aves | Squamata | ...
Description:
Galapagos Islands Image Database is a collection of photographic images about Galapagos Islands. It ...
Database maintenance site:
RIKEN CBS (RIKEN Center for Brain Science)
Organism(s) covered:
Arthropoda | Echiura | Mollusca | Echinodermata | Chordata | ...
Description:
This site is a portal site about databases of sensory systems, brains, and behaviour of invertebrate...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Homo sapiens
Description:
Epigenome project portal site is a portal database for epigenome project about human genome.
This d...
Suspend
PHDB: PH Database
Database maintenance site:
physiome.jp
Organism(s) covered:
Homo sapiens
Description:
PHDB is an integrated database for human physiome and systems biology researches. It contains three ...
Database maintenance site:
Keio University
Organism(s) covered:
Oryza sativa
Description:
OryzaPG-DB is a database for rice proteogenomics. It contains proteomic data such as the proteome of...
Database maintenance site:
National Institute of Technology, Ibaraki College
Organism(s) covered:
Foraminifera
Description:
This database is a collection of the literature on Foraminifera from Japan published during the year...
Database maintenance site:
NICT (National Institute of Information and Communications Technology)
Organism(s) covered:
Schizosaccharomyces pombe
Description:
GFP-fusion library of Schizosaccharomyces pombe' is a database about intracellular localization of G...
Database maintenance site:
Tokyo Metropolitan Institute of Medical Science
Organism(s) covered:
Homo sapiens
Description:
Neuropathology database is a database about fundamental knowledge on anatomy and pathology of the ce...
Database maintenance site:
Osaka University
Organism(s) covered:
Mesorhizobium loti
Description:
This database is a database of macroarray analysis data of Mesorhizobium loti MAFF303099. It contain...
Database maintenance site:
The Japanese Society of Nuclear Medicine
Organism(s) covered:
Homo sapiens
Description:
Annals of Nuclear Medicine is a portal site for two journals published by the Japanese Society of Nu...
Database maintenance site:
National Institute for Physiological Sciences
Organism(s) covered:
Description:
Experimental Techniques for Physiological Sciences is a database about summary of experimental proto...
Database maintenance site:
Committee of D-PAF office
Organism(s) covered:
Flagellaria | Ciliophora | Microsporidia | Monogenea | Myxozoa | ...
Description:
Database of Parasites in Fish and Shellfish (D-PAF) is a database of parasitic organisms in fishes, ...