List of Database Records (records: 2176)
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Database maintenance site:
Allergy Data Laboratories s.c., IFARAI (International Fund for Advanced Research in Allergy and Immunology)
Organism(s) covered:
Homo sapiens
Description:
Allergome aims to supply information on Allergenic Molecules (Allergens) causing an IgE-mediated (al...
Database maintenance site:
AGRIS Administrators, Ohio State University
Organism(s) covered:
Arabidopsis thaliana
Description:
The Arabidopsis Gene Regulatory Information Server (AGRIS) is an information resource of Arabidopsis...
Database maintenance site:
AFTOL Team, Oregon State University
Organism(s) covered:
Fungi
Description:
The Assembling the Fungal Tree of Life (AFTOL) project is dedicated to significantly enhancing our u...
Database maintenance site:
NASC (Nottingham Arabidopsis Stock Centre)
Organism(s) covered:
Arabidopsis thaliana | Brassica
Description:
The Nottingham Arabidopsis Stock Centre (NASC) provides seed and information resources to the Intern...
Database maintenance site:
Advance Biomedical Computing Center, NCI (National Cancer Institute, National Institutes of Health)
Organism(s) covered:
All
Description:
RNAJunction is a database of RNA junctions and kissing loop structures. It contains structure and se...
Database maintenance site:
Laboratory of Bioinformatics, Faculty of Biology, Adam Mickiewicz University
Organism(s) covered:
All
Description:
miRNEST is an integrative collection of animal, plant and virus microRNA data. miRNEST is being grad...
Database maintenance site:
ACPFG (Australian Centre For Plant Functional Genomics)
Organism(s) covered:
Brassica | Hordeum vulgare | Oryza sativa | Triticum
Description:
Implemented the SNP discovery software autoSNP within a relational database to enable the efficient ...
Database maintenance site:
EuroCarbDB, Justus-Liebig University Giessen, Justus-Liebig University Giessen
Organism(s) covered:
All
Description:
Database on carbohydrate building blocks / residues (monosaccharides). Provides various kinds of res...
Database maintenance site:
Organism(s) covered:
All
Description:
CellFinder maps validated gene and protein expression, phenotype and images related to cell types.Th...
Database maintenance site:
Max Planck Institute of Molecular Plant Physiology (MPIMP)
Organism(s) covered:
Viridiplantae
Description:
The Golm Metabolome Database (GMD) provides gas chromatography (GC) mass spectrometry (MS) reference...
Database maintenance site:
Organism(s) covered:
All
Description:
FlowRepository is a database of flow cytometry experiments where you can query and download data col...
Database maintenance site:
JCVI (J. Craig Venter Institute), Northrop Grumman Health IT, Vecna Technologies
Organism(s) covered:
Influenza virus
Description:
The Influenza Research Database (IRD) is a free, open, publicly-accessible resource funded by the U....
Database maintenance site:
NIF (Neuroscience Information Framework)
Organism(s) covered:
All
Description:
The Antibody Registry exists to give researchers a way to universally identify antibodies used in pu...
Database maintenance site:
Centre for Structural and Functional Genomics, Concordia University
Organism(s) covered:
Fungi
Description:
mycoCLAP is a searchable resource for the knowledge and annotation of Characterized Lignocellulose-A...
Database maintenance site:
ASCB (American Society for Cell Biology)
Organism(s) covered:
All
Description:
This library is a public and easily accessible resource database of images, videos, and animations o...
Database maintenance site:
Bioinformatics Centre, University of Copenhagen, BRIC (Biotech Research and Innovation Centre, University of Copenhagen), Danish State Hospital, Finsen Laboratory
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
BloodSpot is a database of mRNA expression in healthy and malignant haematopoiesis and includes data...
Database maintenance site:
CRG (Comparative Genomics Group)
Organism(s) covered:
Musa | Oryza | Solanaceae | Viridiplantae
Description:
PRGdb is an open and daily updated space about plant resistance genes (PRGs), in which all informati...
Database maintenance site:
CERM, University of Florence, Florence
Organism(s) covered:
All
Description:
MetalPDB is a resource aimed at conveying the information available on the three-dimensional structu...
Database maintenance site:
Institute of Systems Biology Ltd, KAUST (King Abdullah University of Science and Technology), Vavilov Institute of General Genetics, Russian Academy of Sciences
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
HOmo sapiens COmprehensive MOdel COllection (HOCOMOCO) v10 provides transcription factor (TF) bindin...
Database maintenance site:
Organism(s) covered:
Description:
This resource provides support to scientific community by providing access to Earth science data and...
Database maintenance site:
Baylor College of Medicine
Organism(s) covered:
All
Description:
Relative evolutionary importance of amino acids within a protein sequence.
Suspend
AgBase
Database maintenance site:
AgBase, Mississippi State University
Organism(s) covered:
Metazoa | Viridiplantae
Description:
AgBase is a curated, open-source, Web-accessible resource for functional analysis of agricultural pl...
Database maintenance site:
Myongji University
Organism(s) covered:
Canis familiaris | Danio rerio | Homo sapiens | Mus musculus | Rattus norvegicus
Description:
Death Domain Database is a manually curated database of protein-protein interactions for Death Domai...
Inactive
FlavorDB
Database maintenance site:
IIIT-Delhi (Indraprastha Institute of Information Technology)
Organism(s) covered:
All
Description:
Flavor is an expression of olfactory and gustatory sensations experienced through a multitude of che...
Database of fuzzy protein complexes: FuzDB
Database maintenance site:
Organism(s) covered:
All
Description:
FuzDB compiles experimentally observed fuzzy protein complexes, where intrinsic disorder (ID) is mai...
Database maintenance site:
Institute of Enzymology, Research Centre for Natural Sciences, Hungarian Academy of Sciences, MTA-ELTE Bioinformatics Research Group
Organism(s) covered:
All
Description:
Mutual Folding Induced by Binding (MFIB) is a repository of protein complexes for which the folding ...
NCI Center for Strategic Scientific Initiatives Data Coordinating Center: CSSI DCC
Database maintenance site:
Frederick National Laboratory for Cancer Research
Organism(s) covered:
All
Description:
The CSSI Data Coordinating Center (DCC) provides the greater Cancer Research and Biomedical Research...
Database maintenance site:
Southwest University
Organism(s) covered:
Arabidopsis thaliana | Bombyx mori | Brassica | Drosophila | Homo sapiens | ...
Description:
The qPrimerDB database stores information on qPCR primers. Accessible through a web front-end provid...
Inactive
VertNet IPT
Database maintenance site:
VertNet
Organism(s) covered:
Vertebrata
Description:
VertNet uses the Integrated Publishing Toolkit (IPT) to host published biodiversity data on the Vert...
Database maintenance site:
Oak Ridge National Laboratory
Organism(s) covered:
Description:
The Oak Ridge National Laboratory Distributed Active Archive Center (ORNL DAAC) mission is to assemb...
Suspend
CRISPRdb
Database maintenance site:
Universitè Paris-Sud 11, CNRS
Organism(s) covered:
Archaea | Bacteria
Description:
CRISPRdb acts as a gateway to a publicly accessible database and software. It enables the easy detec...
Database maintenance site:
Weizmann Institute of Science
Organism(s) covered:
Homo sapiens
Description:
The MalaCards human disease database (http://www. malacards.org/) is an integrated compendium of ann...
Database maintenance site:
Biozentrum, University of Basel
Organism(s) covered:
Caulobacter crescentus | Neisseria meningitidis | Streptomyces coelicolor | Streptomyces granaticolor
Description:
Proteomics database for streptomyces and caulobacter and neisseria. Unique database in the field, co...
Inactive
CropPAL
Database maintenance site:
ANDS (Australian National Data Service), Edwards Group, University of Western Australia
Organism(s) covered:
Hordeum vulgare | Oryza sativa | Triticum aestivum | Zea mays
Description:
The compendium of crop Proteins with Annotated Locations (cropPAL) collates more than 550 data sets ...
Database maintenance site:
IRCCS (Istituto di Ricovero e Cura a Carattere Scientifico)
Organism(s) covered:
Homo sapiens
Description:
CLIMA 2 is the result of an integration effort aimed at including all certified STR profiles of huma...
Coral Trait Database
Database maintenance site:
Organism(s) covered:
Scleractinia
Description:
The Coral Trait Database is a growing compilation of scleractinian coral life history trait, phyloge...
Database maintenance site:
Department of Biochemistry, University of Cambridge, NCBS (National Center for Biological Sciences), Department of Crystallography, Birkbeck College, University of London
Organism(s) covered:
All
Description:
PASS2 contains alignments of structural motifs of protein superfamilies. PASS2 is an automatic versi...
Database maintenance site:
Theoretical Biology and Biophysics, T-10, Los Alamos National Laboratory
Organism(s) covered:
Nairovirus | Viruses | Zika virus
Description:
The Ebola and Hemorrhagic Fever Virus Database stems from the Hemorrhagic Fever Viruses (HFV) Databa...
Inactive
zfishbook
Database maintenance site:
Mayo Clinic
Organism(s) covered:
Danio rerio
Description:
Zfishbook is a real-time database of transposon-labeled mutants in zebrafish. This resource provides...
Suspend
ProteoRed
Database maintenance site:
CIMA (Centro de Investigacion Medica Aplicada)
Organism(s) covered:
Archaea | Bacteria | Eukaryota
Description:
Carlos III Networked Proteomics Platform, ProteoRed-ISCIII is a National Network for the coordinatio...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
All
Description:
The Trace Archives includes the following archives: The Sequence Read Archive (SRA) stores raw seque...
Database maintenance site:
The National Autonomous University of Mexico at the Center for Genomic Sciences, University of Mexico
Organism(s) covered:
Escherichia coli
Description:
RegulonDB is a model of the complex regulation of transcription initiation or regulatory network of ...
Database maintenance site:
University of Athens
Organism(s) covered:
All
Description:
GpDB is a publicly accessible, relational database of G-proteins and their interactions with GPCRs a...
Database maintenance site:
Center for Medical Genetics, Keio University School of Medicine
Organism(s) covered:
Homo sapiens
Description:
DPV provides information on germline pathogenic mutations in the Japanese population. The data of mu...
Database maintenance site:
RADDAR-J
Organism(s) covered:
Homo sapiens
Description:
The RADDAR-J site was constructed for consolidating and supporting registry studies about intractabl...
Database maintenance site:
JEMS (The Japanese Environmental Mutagen Society)
Organism(s) covered:
Homo sapiens | Bacteria | Salmonella Typhimurium | Escherichia coli | Drosophila | ...
Description:
The MUTANTS is a database of compounds (including natural substances) which have been tested for the...
Database maintenance site:
Neotoma Leadership Council
Organism(s) covered:
Spermatophyta | Vertebrata | Bacillariophyta | Ostracoda | Insecta | ...
Description:
The Neotoma Paleoecology Database is a community-curated data repository for paleoecological data sp...
Database maintenance site:
National Museum of Nature and Science
Organism(s) covered:
Tracheophyta
Description:
"Global Red List of Japanese Threatened Plants" provides information of threatened vascular plants f...
Database maintenance site:
National Institute of Genetics, TEC group
Organism(s) covered:
Escherichia coli
Description:
TEC database provides the regulatory targets for all sigma factors and transcription factor (TF)s in...
Database maintenance site:
The University of Tokyo, Forestry and Forest Products Research Institute, Hokkaido Research Organization, Meiji University
Organism(s) covered:
Abies sachalinensis
Description:
TodoFirGene is a transcriptome database for Abies sachalinensis. It provides gene expression data in...