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Server update on March 19, 2025.
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List of Database Records (records: 2170)
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Database maintenance site:
Bonsai Bioinformatics
Organism(s) covered:
All
Description:
Norine is a platform that includes a database of nonribosomal peptides together with tools for their...
Database maintenance site:
BindingDB
Organism(s) covered:
Pan paniscus | Pan troglodytes | Rattus norvegicus | Sus scrofa | Teleostei | ...
Description:
BindingDB enables research by making a growing collection of high-quality, quantitative, protein-lig...
Database maintenance site:
BGEE administrators
Organism(s) covered:
Anolis carolinensis | Bos taurus | Branchiostoma lanceolatum | Caenorhabditis elegans | Canis lupus | ...
Description:
Bgee is a database for retrieval and comparison of gene expression patterns across multiple animal s...
Database maintenance site:
Organism(s) covered:
Description:
The YH database presents the entire DNA sequence of a Han Chinese individual, as a representative of...
Database maintenance site:
BGI (Beijing Genomics Institute)
Organism(s) covered:
Influenza virus
Description:
IVDB hosts complete genome sequences of influenza A virus generated by BGI and curates all other pub...
Database maintenance site:
BGI (Beijing Genomics Institute)
Organism(s) covered:
Gallus gallus
Description:
The chicken Variation Database (ChickVD) is an integrated information system for storage, retrieval,...
Database maintenance site:
Organism(s) covered:
Oryza sativa L. Yssp. Indica | Oryza sativa L. ssp. japonica
Description:
In BGI-RIS, sequence contigs of Beijing indica and Syngenta japonica have been further assembled and...
Database maintenance site:
BC Cancer Agency
Organism(s) covered:
Caenorhabditis elegans | Homo sapiens | Mus musculus | Rattus norvegicus
Description:
The cisRED database holds conserved sequence motifs identified by genome scale motif discovery, simi...
Database maintenance site:
NIBSC (National Institute for Biological Standards and Control)
Organism(s) covered:
Homo sapiens
Description:
The UK Stem Cell Bank (UKSCB) facilitates the use and sharing of quality-controlled stem cell lines ...
Database maintenance site:
Rothamsted Research
Organism(s) covered:
Bacteria | Fungi | Metazoa | Viridiplantae
Description:
PHI-Base contains expertly curated molecular and biological information on genes proven to affect th...
Database maintenance site:
Baylor College of Medicine
Organism(s) covered:
Drosophila melanogaster
Description:
The GDP Database provides a public resource of gene disruptions of Drosophila genes using a single t...
Database maintenance site:
Barcelona University
Organism(s) covered:
Drosophila
Description:
Drosophila Polymorphism Database, is a secondary database designed to provide a collection of all th...
Database maintenance site:
ATCC Standards Development Organisation
Organism(s) covered:
All
Description:
ATCC authenticates microorganisms and cell lines and manages logistics of long-term preservation and...
Database maintenance site:
Arizona State University
Organism(s) covered:
Eukaryota
Description:
The Telomerase Database is a Web-based tool for the study of structure, function, and evolution of t...
Database maintenance site:
Arizona State University, NIH (National Institutes of Health)
Organism(s) covered:
Archaea | Bacteria | Eukaryota | Viruses
Description:
DNASU is a central repository for plasmid clones and collections. Currently we store and distribute ...
Database maintenance site:
California Academy of Sciences
Organism(s) covered:
Formicidae
Description:
AntWeb is a website documenting the known species of ants, with records for each species linked to t...
Database maintenance site:
American Chemical Society
Organism(s) covered:
All
Description:
The CAS (Chemical Abstracts Service) Registry is the CAS substance collection, and is a division of ...
Database maintenance site:
Allergy Data Laboratories s.c., IFARAI (International Fund for Advanced Research in Allergy and Immunology)
Organism(s) covered:
Homo sapiens
Description:
Allergome aims to supply information on Allergenic Molecules (Allergens) causing an IgE-mediated (al...
Database maintenance site:
AGRIS Administrators, Ohio State University
Organism(s) covered:
Arabidopsis thaliana
Description:
The Arabidopsis Gene Regulatory Information Server (AGRIS) is an information resource of Arabidopsis...
Database maintenance site:
AFTOL Team, Oregon State University
Organism(s) covered:
Fungi
Description:
The Assembling the Fungal Tree of Life (AFTOL) project is dedicated to significantly enhancing our u...
Database maintenance site:
NASC (Nottingham Arabidopsis Stock Centre)
Organism(s) covered:
Arabidopsis thaliana | Brassica
Description:
The Nottingham Arabidopsis Stock Centre (NASC) provides seed and information resources to the Intern...
Database maintenance site:
Advance Biomedical Computing Center, NCI (National Cancer Institute, National Institutes of Health)
Organism(s) covered:
All
Description:
RNAJunction is a database of RNA junctions and kissing loop structures. It contains structure and se...
Database maintenance site:
Laboratory of Bioinformatics, Faculty of Biology, Adam Mickiewicz University
Organism(s) covered:
All
Description:
miRNEST is an integrative collection of animal, plant and virus microRNA data. miRNEST is being grad...
Database maintenance site:
ACPFG (Australian Centre For Plant Functional Genomics)
Organism(s) covered:
Brassica | Hordeum vulgare | Oryza sativa | Triticum
Description:
Implemented the SNP discovery software autoSNP within a relational database to enable the efficient ...
Database maintenance site:
EuroCarbDB, Justus-Liebig University Giessen, Justus-Liebig University Giessen
Organism(s) covered:
All
Description:
Database on carbohydrate building blocks / residues (monosaccharides). Provides various kinds of res...
Database maintenance site:
Organism(s) covered:
All
Description:
CellFinder maps validated gene and protein expression, phenotype and images related to cell types.Th...
Database maintenance site:
Max Planck Institute of Molecular Plant Physiology (MPIMP)
Organism(s) covered:
Viridiplantae
Description:
The Golm Metabolome Database (GMD) provides gas chromatography (GC) mass spectrometry (MS) reference...
Database maintenance site:
Organism(s) covered:
All
Description:
FlowRepository is a database of flow cytometry experiments where you can query and download data col...
Database maintenance site:
JCVI (J. Craig Venter Institute), Northrop Grumman Health IT, Vecna Technologies
Organism(s) covered:
Influenza virus
Description:
The Influenza Research Database (IRD) is a free, open, publicly-accessible resource funded by the U....
Database maintenance site:
NIF (Neuroscience Information Framework)
Organism(s) covered:
All
Description:
The Antibody Registry exists to give researchers a way to universally identify antibodies used in pu...
Database maintenance site:
Centre for Structural and Functional Genomics, Concordia University
Organism(s) covered:
Fungi
Description:
mycoCLAP is a searchable resource for the knowledge and annotation of Characterized Lignocellulose-A...
Database maintenance site:
ASCB (American Society for Cell Biology)
Organism(s) covered:
All
Description:
This library is a public and easily accessible resource database of images, videos, and animations o...
Database maintenance site:
Bioinformatics Centre, University of Copenhagen, BRIC (Biotech Research and Innovation Centre, University of Copenhagen), Danish State Hospital, Finsen Laboratory
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
BloodSpot is a database of mRNA expression in healthy and malignant haematopoiesis and includes data...
Database maintenance site:
CRG (Comparative Genomics Group)
Organism(s) covered:
Musa | Oryza | Solanaceae | Viridiplantae
Description:
PRGdb is an open and daily updated space about plant resistance genes (PRGs), in which all informati...
Database maintenance site:
CERM, University of Florence, Florence
Organism(s) covered:
All
Description:
MetalPDB is a resource aimed at conveying the information available on the three-dimensional structu...
Database maintenance site:
Institute of Systems Biology Ltd, KAUST (King Abdullah University of Science and Technology), Vavilov Institute of General Genetics, Russian Academy of Sciences
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
HOmo sapiens COmprehensive MOdel COllection (HOCOMOCO) v10 provides transcription factor (TF) bindin...
Database maintenance site:
Center for Medical Genetics, Keio University School of Medicine
Organism(s) covered:
Homo sapiens
Description:
DPV provides information on germline pathogenic mutations in the Japanese population. The data of mu...
Database maintenance site:
RADDAR-J
Organism(s) covered:
Homo sapiens
Description:
The RADDAR-J site was constructed for consolidating and supporting registry studies about intractabl...
Database maintenance site:
JEMS (The Japanese Environmental Mutagen Society)
Organism(s) covered:
Homo sapiens | Bacteria | Salmonella Typhimurium | Escherichia coli | Drosophila | ...
Description:
The MUTANTS is a database of compounds (including natural substances) which have been tested for the...
Database maintenance site:
Neotoma Leadership Council
Organism(s) covered:
Spermatophyta | Vertebrata | Bacillariophyta | Ostracoda | Insecta | ...
Description:
The Neotoma Paleoecology Database is a community-curated data repository for paleoecological data sp...
Database maintenance site:
National Museum of Nature and Science
Organism(s) covered:
Tracheophyta
Description:
"Global Red List of Japanese Threatened Plants" provides information of threatened vascular plants f...
Database maintenance site:
National Institute of Genetics, TEC group
Organism(s) covered:
Escherichia coli
Description:
TEC database provides the regulatory targets for all sigma factors and transcription factor (TF)s in...
Database maintenance site:
The University of Tokyo, Forestry and Forest Products Research Institute, Hokkaido Research Organization, Meiji University
Organism(s) covered:
Abies sachalinensis
Description:
TodoFirGene is a transcriptome database for Abies sachalinensis. It provides gene expression data in...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Bacteria | Archaea | Viruses | Eukaryota
Description:
Virus-Host DB is a database about the relationships between viruses and their hosts. It provides inf...
Database maintenance site:
Department of Biomolecular Science, Faculty of Science, Toho University
Organism(s) covered:
Homo sapiens
Description:
This database provides the constitutive androstane receptor (CAR) binding sites in the human genome ...
Database maintenance site:
Department of Biomolecular Science, Faculty of Science, Toho University
Organism(s) covered:
Homo sapiens
Description:
This database provides the retinoid X receptor (RXR) binding sites in the human genome identified by...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Allium cepa | Allium cepa var. aggregatum | Allium roylei | Allium fistulosum
Description:
AlliumTDB is a database for transcriptomic data by RNA-Seq about Allium sp. Each entry contains sequ...
Database maintenance site:
Tohoku University Graduate School of Information Sciences
Organism(s) covered:
Chlamydomonas reinhardtii | Cyanidioschyzon merolae
Description:
ALCOdb is a gene coexpression database for microalgae. It provides gene coexpression data about two ...
Database maintenance site:
Nagahama Institute of Bio-Science and Technology
Organism(s) covered:
Homo sapiens
Description:
Mutation@A Glance is an integrated database for genetic variations including disease-causing mutatio...
Database maintenance site:
Nagao Natural Environment Foundation
Organism(s) covered:
Chondrichthyes | Actinopterygii | Lepidosauria | Amphibia | Decapoda | ...
Description:
FiMSeA is a database about fishes of the mainland Southeast Asia. It contains information of fish sp...