List of Database Records (records: 2197)
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Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Solanum lycopersicum
Description:
This is the genome database for tomato, a model organism for the Solanum family. Information such as...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Glycine max
Description:
This database provides marker information for soybean. Each marker has information on EST-SSR, inclu...
Database maintenance site:
Keio University
Organism(s) covered:
Arabidopsis thaliana
Description:
PepBase is a peptide database which consists of experimental data of Arabidopsis phosphopeptide meas...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Glycine max
Description:
This database contains information of genes predicted to be transcription factors from the complete ...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Glycine max | Lotus japonicus | Medicago truncatula
Description:
This database provides comprehensive annotation and genes predicted to be transcription factors from...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Jatropha curcas
Description:
This is a database for the Jatropha genome. It contains the complete genome sequence, amino acid seq...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Trifolium pratense | Trifolium repens
Description:
Clover Garden is a database that provides easy access to clover (Trifolium species) genome informati...
Database maintenance site:
DTU Health Tech
Organism(s) covered:
Description:
ChemProt is a disease chemical biology database, which is based on a compilation of multiple chemica...
Suspend
CADgene: Coronary Artery Disease Gene Database
Database maintenance site:
Huazhong University of Science and Technology
Organism(s) covered:
Homo sapiens
Description:
CADgene is a comprehensive database for Coronary Artery Disease (CAD) genes. It consists of manually...
Database maintenance site:
Department of Fisheries and Allied Aquacultures, Auburn University
Organism(s) covered:
Ictalurus
Description:
cBARBEL (abbreviated from catfish Breeder And Researcher Bioinformatics Entry Location) is an online...
Database maintenance site:
University of California at Santa Cruz
Organism(s) covered:
Description:
BISC is a protein-protein interaction (PPI) database intending to bridge between the two communities...
Suspend
Trypanosomes Database
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Trypanosoma | Homo sapiens
Description:
This is a comprehensive database for enzymes, which catalyze pyrimidine biosynthesis or oxidation-re...
Suspend
PCI DB: Protein-Compound Interaction Database
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Description:
This is a database of collected and merged information on protein-compound interactions throughout t...
Suspend
FUJI DB: Functionally Annotated Japanese Protein Structural Information
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Description:
This is an on-demand analysis database performing functional predictions for amino acid sequences de...
Suspend
CASA db: Comprehensive Amino Acids Sequences Annotated database
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Description:
This is a database of amino acid sequences, which integrates various protein related informations. I...
Database maintenance site:
University California Santa Cruz
Organism(s) covered:
Homo sapiens
Description:
UCSC Xena is a suite of web-based tools to visualize, integrate and analyze cancer genomics and its ...
Database maintenance site:
Tel Aviv University
Organism(s) covered:
Homo sapiens
Description:
SPIKE is a knowledge-base of highly curated human signaling pathways. SPIKE contains three main soft...
Database maintenance site:
CASPUR (Consorzio Interuniversitario per le Applicazioni di Supercalcolo per Universita e Ricerca)
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus | Gallus gallus | Bos taurus | ...
Description:
ASPicDB is a database which provided access to reliable annotations of the alternative splicing patt...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Oryza sativa
Description:
This database is comprised of gene loci whose function has been linked to a phenotype in published p...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Oryza sativa
Description:
Q-TARO is a database of Rice QTLs from published research papers. By screening for redundancy of tra...
Suspend
Species Dictionary
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Description:
Database maintenance site:
Charite - University Medicine Berlin, Institute for Physiology, Structural Bioinformatics Group
Organism(s) covered:
Description:
Fragment Store is a database, that provides access to information about fragments of compounds with ...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Pan troglodytes | Gorilla | Pongo | Hylobates sp.
Description:
This is a page of informational network related to superfamily hominoidea in Japan (chimpanzee, bono...
Database maintenance site:
Organism(s) covered:
Description:
This is a project for users to submit structural annotations for proteins using PDB data and to buil...
Database maintenance site:
Georgetown University
Organism(s) covered:
Hymenoptera
Description:
The Hymenoptera Genome Database (HGD) is a comprehensive database providing access to curated data c...
Database maintenance site:
Charite - University Medicine Berlin, Institute for Physiology, Structural Bioinformatics Group
Organism(s) covered:
Homo sapiens
Description:
CancerResource is a database for drug-target relationships related to cancer as well as for supporti...
Database maintenance site:
ICBMS (Institute for Molecular and Supramolecular Chemistry and Biochemistry, University of Lyon 1)
Organism(s) covered:
Description:
MatrixDB is a database focused on interactions established by extracellular proteins and polysacchar...
Database maintenance site:
Centre for DNA Fingerprinting and Diagnostics
Organism(s) covered:
Bacteria | Archaea
Description:
PSSRdb is a relational database of polymorphic simple sequence repeats (PSSRs) extracted from 85 dif...
Database maintenance site:
Bioinformatics Lab., Institute of Information Science, Academia Sinica
Organism(s) covered:
Description:
The TMPad database contains information on the structural folds in alpha-helical membrane proteins o...
Database maintenance site:
Zhejiang University
Organism(s) covered:
Arabidopsis thaliana | Oryza sativa
Description:
PmiRKB (Plant microRNA Knowledge Base) is a database collecting information on miRNAs from Arabidops...
Database maintenance site:
Institute of Bioinformatics and Systems Biology, National Chiao Tung University
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus | Gallus gallus | Bos taurus | ...
Description:
miRTarBase Version 3.5 is a database that contains information about miRNA-target interactions (MTIs...
Database maintenance site:
Institute for Molecular Bioscience, The University of Queensland
Organism(s) covered:
Eukaryota
Description:
lncRNAdb is a database providing comprehensive annotations of long non-coding RNAs (lncRNAs) in euka...
Database maintenance site:
Institute of Cytology and Preventive Oncology
Organism(s) covered:
Homo sapiens
Description:
CCGD is a manually curated collection of experimenatlly validated genes which are thought to be invo...
Database maintenance site:
Boston University
Organism(s) covered:
Archaea | Bacteria
Description:
COMBREX is a database of experimentally determined and computationally predicted functions for bacte...
Database maintenance site:
RIKEN Quantitative Biology Center
Organism(s) covered:
Caenorhabditis elegans
Description:
WDDD is a database of C. elegans development. The database contains images and quantitative cell div...
Database maintenance site:
Institute of Physics, Polish Academy of Sciences
Organism(s) covered:
Description:
BSDB is a database that houses information about the mechanical stretching of proteins.
Both ends of...
Suspend
BriX
Database maintenance site:
Flanders Institute of Biotechnology, Free University of Brussels
Organism(s) covered:
Description:
Database maintenance site:
Shanghai Jiao Tong University
Organism(s) covered:
Description:
The AlloSteric Database (ASD) provides a central resource for the display, search and analysis of st...
Database maintenance site:
Institute of Theoretical Chemistry, University of Vienna
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
AREsite is a database of the investigation of AU-rich elements (ARE) in vertebrate mRNA UTR sequence...
Database maintenance site:
EuPathDB Bioinformatics Resource Center
Organism(s) covered:
Entamoeba dispar SAW760 | Entamoeba histolytica HM-1:IMSS | Entamoeba histolytica DS4-868 | Entamoeba histolytica KU27 | Entamoeba histolytica KU48 | ...
Description:
This is an database of genomes and results of functional genomic analysis of parasitic amoeba such a...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Homo sapiens
Description:
CellMontage is a system to search and analyze microarray data. The system enables users to compare g...
Suspend
Mutation Database
Database maintenance site:
NBDC (Japan Science and Technology Agency Department of NBDC Program)
Organism(s) covered:
Homo sapiens
Description:
The Mutation Database is a repository for information about genes that are causative for or implicat...
Database maintenance site:
JBIC (Japan Biological Informatics Consortium)
Organism(s) covered:
Description:
PaGE-OM (Phenotype and Genotype-Object Model) is a data model with which PaGE-OM can be applied to o...
Suspend
TMBETA-DISC
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
Database maintenance site:
JT Biohistory Research Hall
Organism(s) covered:
Description:
Quarterly journal "Biohistory" is a repository of a quarterly magazine; "Biohistory" published by JT...
Database maintenance site:
National Institute of Advanced Industrial Science and Technology, Biomedicinal Information Research Center
Organism(s) covered:
Homo sapiens
Description:
PCDq is a human protein complex database with quality index. The protein complex quality index (CQI)...
Database maintenance site:
National Institute of Advanced Industrial Science and Technology, Biomedicinal Information Research Center
Organism(s) covered:
Homo sapiens
Description:
RAvariome is a human genetic variant database for the autoimmune inflammatory disease, Rheumatoid Ar...
Database maintenance site:
Okayama University Institute of Plant Science and Resources
Organism(s) covered:
Embryophyta
Description:
Naturalized Plants in Japan ~Seed-Image database~ is an image database of naturalized alien plant se...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Drosophila melanogaster | Mus musculus | Homo sapiens | Saccharomyces cerevisiae | Dictyostelids | ...
Description:
The Autophagy Database aims to provide researchers with new information about autophagy-related prot...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Homo sapiens
Description:
SAHG is a database of protein structure predictions. The database contains predictions for proteins ...