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List of Database Records (records: 2182)
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Organism covered
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Database maintenance site:
Churchill Group, The Jackson Laboratory
Organism(s) covered:
Mus musculus
Description:
This site provides access to raw data from various QTL (quantitative trait loci) studies using roden...
Database maintenance site:
UCSD (University of California San Diego)
Organism(s) covered:
All
Description:
This freely accessible database details a comprehensive IUBMB approved classification system for mem...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
The PhysioNet Resource is intended to stimulate current research and new investigations in the study...
Database maintenance site:
Organism(s) covered:
All
Description:
NIF maintains the largest searchable collection of neuroscience data, the largest catalog of biomedi...
Database maintenance site:
RUCDR Infinite Biologics, Washington University in St Louis School of Medicine
Organism(s) covered:
Homo sapiens
Description:
This resource stores and distributes clinical data and biomaterials (DNA samples and cell lines) ava...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
The NIDA Data Share web site is an electronic environment that allows data from completed clinical t...
Database maintenance site:
ICPSR (Inter-university Consortium for Political and Social Research)
Organism(s) covered:
Homo sapiens | Human immunodeficiency virus
Description:
NAHDAP acquires, preserves and disseminates data relevant to drug addiction and HIV research. The sc...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
Neuroimaging Informatics Tools and Resources Collaboratory Resources Registry (NITRC-R) describes so...
Database maintenance site:
ATCC Standards Development Organisation
Organism(s) covered:
All | Clostridium Difficile | Enterovirus | Human metapneumovirus | Staphylococcus | ...
Description:
BEI Resources provides reagents, tools and information for studying Category A, B, and C priority pa...
Database maintenance site:
The UT Center for Integrative and Translational Genomics, NIMH (National Institute of Mental Health)
Organism(s) covered:
Arabidopsis thaliana | Drosophila melanogaster | Glycine max | Homo sapiens | Hordeum vulgare L. | ...
Description:
GeneNetwork is a group of linked data sets and tools used to study complex networks of genes, molecu...
Database maintenance site:
Organism(s) covered:
Canis | Homo sapiens | Mus musculus
Description:
The CardioVascular Research Grid (CVRG) project is creating an infrastructure for sharing cardiovasc...
Database maintenance site:
Organism(s) covered:
Homo sapiens
Description:
The goal of Biologic Specimen and Data Repository Information Coordinating Center (BioLINCC) is to f...
Database maintenance site:
Organism(s) covered:
Description:
The database provides a means of investigating alternative splicing and can be used for identifying ...
Database maintenance site:
NCKU (National Cheng Kung University) Bioinformatics Center
Organism(s) covered:
Homo sapiens
Description:
The tumor-associated gene (TAG) database was designed to utilize information from well-characterized...
Database maintenance site:
National University of Singapore
Organism(s) covered:
Homo sapiens
Description:
A database for facilitating the search for drug adverse reaction target. DART contains information a...
Database maintenance site:
NLM (National Library of Medicine)
Organism(s) covered:
All
Description:
ChemIDplus is a web-based search system that provides access to structure and nomenclature authority...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
All
Description:
PubMed Central (PMC) is the U.S. National Institutes of Health (NIH) digital archive of biomedical a...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Eukaryota
Description:
The organelle genomes are part of the NCBI Reference Sequence (RefSeq) project that provides curated...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Viruses
Description:
NCBI Viral Genomes Resource is a collection of virus genomic sequences that provides curated sequenc...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Influenza virus
Description:
Influenza Virus Resource presents data obtained from the NIAID Influenza Genome Sequencing Project a...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
All
Description:
NCBI takes great care to ensure that the translation for each coding sequence (CDS) present in GenBa...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Arabidopsis thaliana | Caenorhabditis elegans | Homo sapiens | Mus musculus | Rattus norvegicus
Description:
AceView provides a curated, comprehensive and non-redundant sequence representation of all public mR...
Database maintenance site:
NCBS (National Center for Biological Sciences)
Organism(s) covered:
All
Description:
SSToSS is a database which provides sequence-structural templates of single member protein domain su...
Database maintenance site:
MMMP (Melanoma Molecular Map Project)
Organism(s) covered:
Homo sapiens
Description:
A collection of molecular interaction maps and pathways involved in cancer development and progressi...
Database maintenance site:
Organism(s) covered:
All
Description:
SUPERFAMILY is a database of structural and functional annotation for all proteins and genomes.
Database maintenance site:
MCPSB (Manitoba Centre for Proteomics and Systems Biology)
Organism(s) covered:
All
Description:
The Global Proteome Machine Database (gpmDB holds the minimum amount of information necessary for co...
Database maintenance site:
LBNL (Lawrence Berkeley National Laboratory)
Organism(s) covered:
All
Description:
A 16S rRNA gene database which provides chimera screening, standard alignment, and taxonomic classif...
Database maintenance site:
Organism(s) covered:
Description:
The Protein Model DataBase (PMDB), is a database that collects manually built three dimensional prot...
Database maintenance site:
Krasnow Institute for Advanced Study, The National Academies of Sciences, Engineering, and Medicine
Organism(s) covered:
Metazoa
Description:
NeuroMorpho.Org is a centrally curated inventory of 3D digitally reconstructed neurons associated wi...
Database maintenance site:
Biological Sciences Research Group, Instituto Superior Técnico, Knowledge Discovery & Bioinformatics Research Group, Instituto Superior Técnico
Organism(s) covered:
Description:
YEASTRACT (Yeast Search for Transcriptional Regulators And Consensus Tracking) is a curated reposito...
Database maintenance site:
Kansas State University
Organism(s) covered:
Tribolium castaneum
Description:
BeetleBase is a community resource for Tribolium genetics, genomics and developmental biology. The d...
Database maintenance site:
DOE JGI (Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory)
Organism(s) covered:
Bacteria | Eukaryota | Fungi
Description:
The integrated microbial genomes (IMG) system is a data management, analysis and annotation platform...
Database maintenance site:
Infrafrontier Research Infrastructure, Infrafrontier Gmbh
Organism(s) covered:
Mus musculus
Description:
The European Mouse Mutant Archive (EMMA) is a non-profit repository for the collection, archiving (v...
Database maintenance site:
Iowa State University
Organism(s) covered:
Glycine max | Glycine soja
Description:
SoyBase, the USDA-ARS soybean genetic database, is a comprehensive repository for professionally cur...
Database maintenance site:
International Union of Basic and Clinical Pharmacology
Organism(s) covered:
Homo sapiens | Mus musculus | Plasmodium falciparum | Rattus
Description:
The information in the database is presented at two levels: the initial view or landing pages for ea...
Database maintenance site:
IMA (International Mycological Association), NLM (National Library of Medicine)
Organism(s) covered:
Fungi
Description:
MycoBank was created for the mycological community (as well as scientific community more generally) ...
Database maintenance site:
Institute of Bioinformatics
Organism(s) covered:
Homo sapiens
Description:
Human Proteinpedia is a community portal for sharing and integration of human protein data. It allow...
Database maintenance site:
ISSBAT (Higher Institute of Applied Biological Sciences of Tunis), Laval University
Organism(s) covered:
Bacteria
Description:
BACTIBASE contains calculated or predicted physicochemical properties of bacteriocins produced by bo...
Database maintenance site:
ISB (Institute for Systems Biology), Seattle Proteome Center
Organism(s) covered:
Apis | Bos taurus | Caenorhabditis elegans | Candida | Danio rerio | ...
Description:
The PeptideAtlas Project provides a publicly-accessible database of peptides identified in tandem ma...
Database maintenance site:
INSERM (Institut National de la Sante et de la Recherche Medicale)
Organism(s) covered:
Viruses
Description:
VirHostNet 2.0 integrates an extensive and original literature-curated dataset of virus/virus and vi...
Database maintenance site:
National Institute of Agrobiological Sciences, ProDom Team
Organism(s) covered:
Spodoptera frugiperda
Description:
SpodoBase is an integrated database for the genomics of the Lepidoptera Spodoptera frugiperda. It is...
Database maintenance site:
BioComputing laboratory, University of Padua
Organism(s) covered:
Daphnia | Daphnia magna | Daphnia pulex
Description:
wFleaBase includes data from all species of the genus, yet the primary species are Daphnia pulex and...
Database maintenance site:
BioComputing laboratory, University of Padua
Organism(s) covered:
Anopheles gambiae | Arabidopsis thaliana | Caenorhabditis elegans | Danio rerio | Drosophila melanogaster | ...
Description:
euGenes provides a common summary of gene and genomic information from eukaryotic organism databases...
Database maintenance site:
BioComputing laboratory, University of Padua
Organism(s) covered:
All
Description:
The Database of Protein Disorder (DisProt) is a curated database that provides information about int...
Database maintenance site:
Indian Institute of Science
Organism(s) covered:
All
Description:
Conformation Angles DataBase [ CADB-3.0 ] is a comprehensive, authoritative and timely knowledge bas...
Database maintenance site:
University of Tampere
Organism(s) covered:
Homo sapiens
Description:
KinMutBase is a comprehensive database of disease-causing mutations in protein kinase domains. This ...
Database maintenance site:
LMGM (Laboratoire de Microbiologie et Genetique Moleculaires), SBI (The Structural Bioinformatics Laboratory), bioinsilico.org
Organism(s) covered:
All
Description:
ArchDB is a compilation of structural classifications of loops extracted from known protein structur...
Database maintenance site:
LMGM (Laboratoire de Microbiologie et Genetique Moleculaires), SBI (The Structural Bioinformatics Laboratory)
Organism(s) covered:
Gallus gallus | Homo sapiens | Mus musculus | Rattus norvegicus
Description:
ABS is a database of Annotated regulatory Binding Sites from known binding sites identified in promo...
Database maintenance site:
IGBMC (Institut de Genetique et de Biologie Moleculaire et Cellulaire), LMGM (Laboratoire de Microbiologie et Genetique Moleculaires)
Organism(s) covered:
All
Description:
BAliBASE; a benchmark alignment database, including enhancements for repeats, transmembrane sequence...
Database maintenance site:
ICGEB (International Centre Genetic Engineering and Biotechnology), Jedlik Laboratories: Bioinformatics, Faculty of Information Technology, Pázmány Péter Catholic University
Organism(s) covered:
All
Description:
The Protein Classification Benchmark Collection was created in order to create standard datasets on ...