List of Database Records (records: 2176)
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Database maintenance site:
Organism(s) covered:
Mus musculus
Description:
MONOCLdb is an integrative and interactive database designed to retrieve and visualize annotations a...
Database maintenance site:
Laura and John Arnold Foundation, Stanford University, NIH (National Institutes of Health)
Organism(s) covered:
Homo sapiens
Description:
The OpenNeuro project (formerly known as the OpenfMRI project) was established in 2010 to provide a ...
Database maintenance site:
University of Delhi
Organism(s) covered:
Oryza sativa
Description:
The Manually Curated Database of Rice Proteins (MCDRP) is a manually-curated database based on publi...
Database maintenance site:
IBI (Integrative Biomedical Informatics Group, Research Programme on Biomedical Informatics (GRIB) IMIM-UPF)
Organism(s) covered:
Homo sapiens
Description:
DisGeNET is a discovery platform containing one of the largest collections available of genes and va...
Database maintenance site:
University of Maryland
Organism(s) covered:
Bacteria
Description:
CollecTF is a database of transcription factor binding sites (TFBS) in the Bacteria domain. It aims ...
Database maintenance site:
Open Microscopy Environment
Organism(s) covered:
All
Description:
OMERO is client-server software for visualization, management and analysis of biological microscope ...
Database maintenance site:
Ragon Institute, SBMRI, Sanford-Burnham Prebys Medical Discovery Institute, TSRI
Organism(s) covered:
Homo sapiens | Human immunodeficiency virus
Description:
The discovery of broadly neutralizing antibodies (bNAbs) has provided an enormous impetus to the HIV...
Database maintenance site:
CNB (National Centre for Biotechnolgy)
Organism(s) covered:
Drosophila melanogaster | Homo sapiens
Description:
CentrosomeDB is a collection of human and drosophila centrosomal genes that were reported in the lit...
Database maintenance site:
UCSF (Laboratory of Andrej Sali, University of California at San Francisco)
Organism(s) covered:
All
Description:
ModBase (http://salilab.org/modbase) is a database of annotated comparative protein structure models...
Database maintenance site:
CiteAB, STORM Consultancy
Organism(s) covered:
All | Mus musculus | Xenopus
Description:
CiteAb is the largest citation-ranked antibody search engine and provides a simple way to find antib...
Database maintenance site:
Organism(s) covered:
Description:
GeneProf Data is an open web resource for analysed functional genomics experiments. We have built up...
Database maintenance site:
Michael Baudis Group, Institute of Molecular Life Sciences, SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:
Homo sapiens
Description:
Part of the Progenetix project, the arrayMap database facilitates the study of the genetics of human...
Database maintenance site:
Michael Baudis Group, Institute of Molecular Life Sciences
Organism(s) covered:
Homo sapiens
Description:
The Progenetix database provides an overview of copy number abnormalities in human cancer from Compa...
Database maintenance site:
Organism(s) covered:
Description:
The JCB DataViewer is an image hosting and visualization platform for original microscopy image data...
Database maintenance site:
University of Porto
Organism(s) covered:
Caenorhabditis elegans | Drosophila melanogaster | Homo sapiens | Macaca mulatta | Mus musculus | ...
Description:
A comprehensive on-line resource with curated datasets of mitochondrial DNA (mtDNA) rearrangements.
Database maintenance site:
University of Missouri
Organism(s) covered:
Glycine max
Description:
Soybean Knowledge Base (SoyKB), is a comprehensive all-inclusive web resource developed for soybean ...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
All | Anopheles gambiae | Arabidopsis thaliana | Bos indicus | Bos taurus | ...
Description:
EBI Metagenomics has changed its name to MGnify to reflect a change in scope. This is a free-to-use ...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute), ISB (Institute for Systems Biology), UCSD (University of California San Diego), National Center for Protein Sciences, University of Washington
Organism(s) covered:
All
Description:
The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteom...
Database maintenance site:
GigaScience/BGI HK Ltd
Organism(s) covered:
All
Description:
GigaDB primarily serves as a repository to host data and tools associated with articles in GigaScien...
Database maintenance site:
Yale University School of Medicine
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
ORDB began as a database of vertebrate OR genes and proteins and continues to support sequencing and...
Database maintenance site:
Washington University in St Louis School of Medicine
Organism(s) covered:
Saccharomyces cerevisiae
Description:
ScerTF is a database of position weight matrices (PWMs) for transcription factors in Saccharomyces s...
Database maintenance site:
Department of Molecular Biology, The Scripps Research Institute, Washington State University
Organism(s) covered:
Saccharomyces cerevisiae
Description:
The National Center for Research Resources' Yeast Resource Center is located at the University of Wa...
Database maintenance site:
Washington State University
Organism(s) covered:
Fragaria vesca | Malus domestica | Malus x domestica | Prunus mume | Prunus persica | ...
Description:
The Genome Database for Rosaceae (GDR) is a curated and integrated web-based relational database pro...
Database maintenance site:
United States Department of Health and Human Services, VectorBase
Organism(s) covered:
Aedes aegypti | Anopheles gambiae | Chelicerata | Culicidae | Diptera | ...
Description:
VectorBase is a web-accessible data repository for information about invertebrate vectors of human p...
Database maintenance site:
University of Wisconsin-Madison
Organism(s) covered:
All
Description:
ASAP is a relational database and web interface developed to store, update and distribute genome seq...
Database maintenance site:
Jurisica Lab, Ontario Cancer Institute
Organism(s) covered:
Caenorhabditis elegans | Drosophila melanogaster | Homo sapiens | Mus musculus | Rattus norvegicus
Description:
The I2D (Interologous Interaction Database) is a database of known and predicted mammalian and eukar...
Database maintenance site:
University of Toronto
Organism(s) covered:
Escherichia coli
Description:
Bacteriome.org is a database integrating physical (protein-protein) and functional interactions with...
Database maintenance site:
University of Tartu
Organism(s) covered:
Eukaryota | Fungi
Description:
UNITE is a database and sequence management environment centered on the eukaryotic nuclear ribosomal...
Database maintenance site:
NCS (United Kingdom National Crystallography Service), University of Southampton
Organism(s) covered:
Description:
eCrystals is the archive for Crystal Structures generated by the Southampton Chemical Crystallograph...
Database maintenance site:
University of Nebraska Medical Center
Organism(s) covered:
All
Description:
The Antimicrobial Peptide Database (APD) contains information on antimicrobial peptides from across ...
Database maintenance site:
Manchester Center for Integrative Systems Biology
Organism(s) covered:
Saccharomyces cerevisiae
Description:
This is a portal to the consensus yeast metabolic network as reconstructed from the genome sequence ...
Database maintenance site:
University of Leiden
Organism(s) covered:
Anopheles gambiae | Bacillus subtilis | Bombyx mori | Bordetella pertussis | Bos taurus | ...
Description:
PseudoBase is a collection of RNA pseudoknots that have been made available for retrieval to the sci...
Database maintenance site:
University of Helsinki
Organism(s) covered:
Homo sapiens
Description:
Clinical information about tumor samples and microarray data, with emphasis on array comparative gen...
Database maintenance site:
Georgetown University, Protein Information Resource Consortium, University of Delaware
Organism(s) covered:
All
Description:
The RESID Database of Protein Modifications is a comprehensive collection of annotations and structu...
Database maintenance site:
University of Cologne
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
VBASE2 is an integrative database of germ-line variable genes from the immunoglobulin loci of human ...
Database maintenance site:
University of California Santa Barbara
Organism(s) covered:
Metazoa | Viridiplantae
Description:
The Paleobiology Database seeks to provide researchers and the public with information about the ent...
Database maintenance site:
University of California Los Angeles
Organism(s) covered:
Mus musculus
Description:
Knockout mutant mice strains. The KOMP repository is a resource of mouse embryonic stem (ES) cells c...
Database maintenance site:
Institute for Genomics and Bioinformatics, University of California, Irvine, University of California Los Angeles
Organism(s) covered:
Description:
ChemDB is a chemical database containing nearly 5M commercially available small molecules, important...
Database maintenance site:
Cincinnati Children's Hospital Medical Center, University of Calgary
Organism(s) covered:
Xenopus | Xenopus laevis | Xenopus tropicalis
Description:
Xenbase is the model organism database for Xenopus laevis and X. (Silurana) tropicalis which was cre...
Database maintenance site:
Wishart Lab, University of Alberta
Organism(s) covered:
All
Description:
Toxin and Toxin Target Database (T3DB) is a bioinformatics resource that combines detailed toxin dat...
Database maintenance site:
University College London
Organism(s) covered:
All
Description:
The CATH database is a free, publicly available online resource that provides information on the evo...
Database maintenance site:
Universite de Geneve
Organism(s) covered:
Bacteria | Eukaryota | Vertebrata
Description:
OrthoDB presents a catalog of eukaryotic orthologous protein-coding genes. Orthology refers to the l...
Database maintenance site:
University of Maryland
Organism(s) covered:
Homo sapiens
Description:
Domain mapping of disease mutations (DMDM) is a database in which each disease mutation can be displ...
Database maintenance site:
Trinity College Dublin
Organism(s) covered:
All
Description:
The Enzyme Database was developed as a new way to access the data of the IUBMB Enzyme Nomenclature L...
Database maintenance site:
Naturalis Biodiversity Center
Organism(s) covered:
All
Description:
TreeBASE is a repository of phylogenetic information, specifically user-submitted phylogenetic trees...
Database maintenance site:
Toronto Hospital for Sick Children
Organism(s) covered:
All
Description:
iRefWeb is an interface to a relational database containing the latest build of the interaction Refe...
Database maintenance site:
Organism(s) covered:
Description:
Aspergillus Genomes is a resource for viewing annotated genes arising from various Aspergillus seque...
Database maintenance site:
NTP (National Toxicology Program, NIEHS, NIH)
Organism(s) covered:
All
Description:
The Chemical Effects in Biological Systems (CEBS) database houses data of interest to environmental ...
Database maintenance site:
University of California Los Angeles, University of Missouri, University of North Carolina, The Jackson Laboratory
Organism(s) covered:
Mus musculus
Description:
The MMRRC distributes and cryopreserves scientifically valuable, genetically engineered mouse strain...
Database maintenance site:
The Jackson Laboratory
Organism(s) covered:
Mus musculus
Description:
JAX Mice are the industry standard for animal model research, using precise genome solutions to bett...