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Server update on March 19, 2025.
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List of Database Records (records: 2170)
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Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
KEGG ENZYME is a database of enzymes involved in recognized KEGG biochemical reactions, and can be s...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
KEGG COMPOUND is a database of biologically relevant compounds, including chemical structures and as...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Homo sapiens
Description:
KEGG DISEASE is a database of human diseases with information on perturbed molecular networks. Each ...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Description:
KEGG DRUG is a comprehensive database of drug information about all marketed drugs in Japan, as well...
Database maintenance site:
Seikagaku Corporation
Organism(s) covered:
Description:
Glycoforum is a portal site for glycoscience research. This portal site contains a search engine of ...
Database maintenance site:
National Institute for Basic Biology
Organism(s) covered:
Embryophyta
Description:
PODB3 is a collection of databases describing organelles and their behavior in plants. The site cont...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
TogoTV international is a repository of educational and tutorial videos demonstrating how to use bio...
Database maintenance site:
NBDC (Japan Science and Technology Agency Department of NBDC Program)
Organism(s) covered:
Description:
Taxonomy icon is a collection of icon materials illustrating biological species including Bacteria, ...
Database maintenance site:
NIES (National Institute for Environmental Studies)
Organism(s) covered:
Mammalia | Aves | Amphibia | Insecta | Tracheophyta | ...
Description:
Invasive Species of Japan is a integrated database of invasive and alien species in Japan. Each entr...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
This site contains a comprehensive collection of protein segments that were grouped according to sim...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Rattus norvegicus
Description:
This website was created to investigate whether it would be possible to share biological sample imag...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
GMDB is a database of glycan mass spectral data. It provides a novel tool for use in glycomics resea...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Abrus precatorius | Agaricus bisporus | Agrocybe cylindracea | Aleuria aurantia | Allium sativum | ...
Description:
This database contains information about the quantity of interactions noted among a series of lectin...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Caenorhabditis elegans | Mus musculus
Description:
This is a database of N-glycoproteins providing knowledge found by studying C.elegans N2 and glycopr...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
This database provides information on the 180 human glycogenes discovered up to the time it was crea...
Database maintenance site:
NITE (National Institute of Technology and Evaluation)
Organism(s) covered:
Bacteria | Archaea | Fungi | Rhodophyta | Homo sapiens | ...
Description:
NBRC is a database about bioresources collected by Biological Resource Center (NBRC), NITE. It inclu...
Database maintenance site:
NIHS (National Institute of Health Sciences)
Organism(s) covered:
Description:
JECDB is a database of toxicity testing reports for existing chemicals maintained by National Instit...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Metazoa | Embryophyta | Fungi | Hexapoda | Caenorhabditis elegans | ...
Description:
Database maintenance site:
Tokyo Institute of Technology
Organism(s) covered:
Streptococcus pyogenes
Description:
This is a database of the Streptococcus pyogenes genome. The database contains a genome browser, lis...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Homo sapiens
Description:
NEDO database is a database of human spleen cDNA clones with sequence information for spleen clones ...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Arabidopsis thaliana
Description:
This is a database of over-expression experiments in Arabidopsis T87 cultured cells. Approximately 1...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Acacia mangium | Arabidopsis thaliana | Cosmos bipinnatus | Dicksonia antarctica | Escherichia coli | ...
Description:
MassBase is a fundamental archive of mass spectral tags (MST) for metabolomics. It includes both kno...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Trifolium pratense
Description:
This is a database of red clover expressed sequences. The database contains consensus gene sequences...
Database maintenance site:
National Agriculture and Food Research Organization, National Institute of Livestock and Grassland Science
Organism(s) covered:
Description:
This encyclopedia describes forage crop diseases in Japan, including causal agents and photographs o...
Database maintenance site:
National Agriculture and Food Research Organization,National Institute of Vegetable and Tea Science
Organism(s) covered:
Brassica rapa | Allium fistulosum | Cucumis sativus | Solanum melongena | Cucumis melo | ...
Description:
This database contains DNA marker and linkage map information for a variety of garden crops. For eac...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
Protein Globe is a visual database of protein structures. The database consists of a spherical repre...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
Yorodumi is a database of 3D structures of biological molecules. This database contains 3D structure...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
EM Navigator is a web site to browse 3D electron microscopy (3D-EM) data of biological molecules and...
Database maintenance site:
Society for Actinomycetes Japan
Organism(s) covered:
Actinobacteria
Description:
Digital Atlas of Actinomycetes is a collection of micrographs and annotations about Actinomycetes. D...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Fungi
Description:
The Japanese Fungi on Plants is an illustrated Encyclopedia of Japanese Filamentous Fungi, which col...
Database maintenance site:
Japanese Foundation for Cancer Research
Organism(s) covered:
Homo sapiens
Description:
This database stores genotype frequencies of SNPs, which have been genotyped to identify genes respo...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Danio rerio
Description:
This is a database of the Koichi Kawakami Laboratory of the National Institute of genetics (NIG). It...
Database maintenance site:
University of Oregon/Zebrafish Information Network
Organism(s) covered:
Danio rerio
Description:
ZFIN is a central repository and web-based resource for zebrafish genetics and development. This dat...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Danio rerio
Description:
National BioResource Project Zebrafish is a database for preservation and distribution of zebrafish ...
Database maintenance site:
Ecole normale superieure
Organism(s) covered:
Saccharomyces cerevisiae | Schizosaccharomyces pombe
Description:
yMGV is a database of yeast gene expression information collected by microarray. The database contai...
Database maintenance site:
University of Massachusetts Amherst
Organism(s) covered:
Saccharomyces cerevisiae
Description:
The yeast snoRNA database is a comprehensive database for small nucleolar RNAs (snoRNAs) from the ye...
Database maintenance site:
The University of Tokyo Graduate School of Science Department of Biophysics and Biochemistry
Organism(s) covered:
Saccharomyces cerevisiae
Description:
The Yeast Interacting Proteins Database is a database of binary protein interactions detected by a y...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Xanthomonas oryzae pv. Oryzae
Description:
Database maintenance site:
Ontario Institute For Cancer Research
Organism(s) covered:
Caenorhabditis elegans | Caenorhabditis briggsae | Caenorhabditis remanei | Caenorhabditis brenneri | Caenorhabditis japonica | ...
Description:
WormBase is a database of information on nematodes and other worms. The database contains extensive ...
Database maintenance site:
SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:
Description:
World-2DPAGE is a database of proteomic reference resources. The database collects information on 2D...
Database maintenance site:
Harvard Medical School
Organism(s) covered:
Caenorhabditis elegans
Description:
WORFDB is a database of C. elegans open reading frame information. The database contains data from O...
Database maintenance site:
National Institute of Agrobiological Sciences
Organism(s) covered:
Oryza sativa
Description:
Database maintenance site:
Walter and Eliza Hall Institute of Medical Research
Organism(s) covered:
Plasmodium falciparum
Description:
Database maintenance site:
LBNL (Lawrence Berkeley National Laboratory)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
VISTA Enhancer Browser is a database of mammalian gene enhancers. The database contains information ...
Database maintenance site:
Academia Sinica
Organism(s) covered:
Viruses
Description:
Viral Probe is a list that contains a vast number of viral probes identified experimentally in the s...
Database maintenance site:
Stanford University
Organism(s) covered:
Eukaryota | Bacteria | Viruses
Description:
Vector DB is a database of genetic constructs used in molecular biology. The database contains seque...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Homo sapiens
Description:
This site contains three systems that can be searched.
The Genome Browser combines a database of ava...
Database maintenance site:
Institute for Biomedical Technologies
Organism(s) covered:
Eukaryota
Description:
UTRdb is a database of untranslated region sequences and other information related to the regulation...
Database maintenance site:
The University of Tokyo Graduate School of Science
Organism(s) covered:
Saccharomyces cerevisiae
Description:
This site provides access to the Saccharomyces database. Users can browse or search by chromosome, g...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Nilaparvata lugens
Description:
This database contains cDNA (EST) information for the brown planthopper (BPH, Nilaparvata lugens). E...