List of Database Records (records: 2186)
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Database maintenance site:
JCVI (J. Craig Venter Institute)
Organism(s) covered:
Description:
TIGRFAMs is a database of sequence alignments of protein coding sequences in multiple species. The d...
Database maintenance site:
Stanford University
Organism(s) covered:
Homo sapiens | Mus musculus | Drosophila melanogaster | Danio rerio
Description:
The Wnt Homepage is a database of wnt pathway information. The database contains information on wnt ...
Database maintenance site:
Indiana University
Organism(s) covered:
Bacteria | Viruses
Description:
This is a database of bacterial RNA molecules with properties of both tRNA and mRNA, which described...
Database maintenance site:
University at Albany
Organism(s) covered:
Eukaryota | Bacteria | Archaea
Description:
The RNA modification database is a integrated database of posttranscriptionally modified nucleosides...
Database maintenance site:
University of Edinburgh
Organism(s) covered:
Vertebrata
Description:
The Kidney Development Database is a resource of experimental information collected from multiple sp...
Database maintenance site:
University of Minnesota
Organism(s) covered:
Candida albicans
Description:
The Candida Albicans Physical Map Website is a portal site about Candida albicans genome and its ann...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
All
Description:
Taxonomy is a database of systematic classifications of organisms repesented in public sequencing da...
Database maintenance site:
FLI (Leibniz Institute on Aging - Fritz Lipmann Institute)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
TassDB is a database of alternative gene splicing information. The database contains three different...
Database maintenance site:
Boston University
Organism(s) covered:
Anopheles gambiae | Apis mellifera | Arabidopsis thaliana | Bos taurus | Caenorhabditis briggsae | ...
Description:
TRDB is a database of repeated genetic sequences. Users can query repeat sequences, use an analysis ...
Database maintenance site:
Ohio State University
Organism(s) covered:
Arabidopsis thaliana
Description:
TAIR is a database of Arabidopsis thaliana information. The database contains genetic and molecular ...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Nicotiana tabacum
Description:
This site provides information about the results found in a collaborative project of the Laboratorie...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Sus scrofa
Description:
This is a viewer of Swine DNA marker. It provides information of the primers, results of linkage map...
Database maintenance site:
Georg-August-Universitat Gottingen
Organism(s) covered:
Bacillus subtilis
Description:
SubtiWiki is a collaborative user database for the bacterium Bacillus subtilis. The database contain...
Database maintenance site:
Institut Pasteur
Organism(s) covered:
Bacillus subtilis
Description:
SubtiList is a database of the Bacillus subtilis genome. The database contains sequence and position...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
Structure is a database of three-dimensional structures of biological molecules. The database contai...
Database maintenance site:
STRING Consortium
Organism(s) covered:
Bacteria | Archaea | Eukaryota | Viruses
Description:
STRING is a database of known and predicted protein interactions, including both physical and functi...
Database maintenance site:
National Institute of Standards and Technology
Organism(s) covered:
Homo sapiens
Description:
STRBase is a database of markers for human identification. The database contains information on the ...
Database maintenance site:
Department of Biochemistry, University of Texas Health Science Center
Organism(s) covered:
Bacteria | Archaea | Eukaryota
Description:
SRPDB is a database of signal recognition particle sequences in bacteria, archaea, fungi, and plants...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
All
Description:
SRA is a database of raw sequence reads from next-generation sequencing systems. The database contai...
Suspend
SpBase: Strongylocentrotus purpuratus database
Database maintenance site:
California Institute of Technology
Organism(s) covered:
Echinoidea
Description:
SpBase is a database of the sea urchin genome. In addition to a genome browser, the database contain...
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Glycine max
Description:
This is a database of soybean cDNA sequences. In addition to soybean sequence information, it contai...
Database maintenance site:
River Road Bio
Organism(s) covered:
Homo sapiens
Description:
SNPedia is a database of human genetic variation. The database contains entries on DNA variations co...
Database maintenance site:
University of Miyazaki Frontier Science Research Center
Organism(s) covered:
Eukaryota
Description:
snOPY is a database of small nucleolar RNA orthology. The database contains snoRNA sequences for sev...
Database maintenance site:
EMBL (European Molecular Biology Laboratory)
Organism(s) covered:
Homo sapiens | Mus musculus | Drosophila melanogaster | Caenorhabditis elegans | Arabidopsis thaliana | ...
Description:
SMART is a database of protein domains found in several different protein classes. The database cont...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Eukaryota
Description:
This site offers the tabulated information of the GPCR (G-protein coupled receptor) genes of 56 euka...
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Schizosaccharomyces pombe
Description:
This is a database of gene information in Schizosaccharomyces pombe. The database contains informati...
Database maintenance site:
Wellcome Sanger Institute
Organism(s) covered:
Bacteria | Eukaryota | Viruses
Description:
Wellcome Trust Sanger Institute is a major European research program. The website contains informati...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Oryza sativa
Description:
The SALAD database supports the construction of dendrograms from amino acid sequence similarities in...
Suspend
SABRE: Systematic consolidation of Arabidopsis and other Botanical REsource
Database maintenance site:
RIKEN Tsukuba Institute
Organism(s) covered:
Arabidopsis thaliana | Thellungiella halophila | Nicotiana tabacum | Manihot esculenta | Populus nigra | ...
Description:
SABRE is a database of plant resources. The database contains collected information about Arabidopsi...
Database maintenance site:
Gesellschaft fur Biotechnologische Forschung
Organism(s) covered:
Eukaryota
Description:
S/MARt DB is a database of cellular scaffolds and matrix data. The database contains scaffold, matri...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Mus musculus
Description:
ROUGE is a database of long rodent cDNA clones designed to compliment the HUGE database of long huma...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Description:
This site is a database of structures, functions and functional networks of proteins researched by R...
Suspend
RIKEN Mouse Genome Encyclopedia DNABook
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Mus musculus
Description:
Suspend
RIKEN Hub Database
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Description:
RIKEN Hub Database is an integrated database of data resources published by RIKEN. Thid database con...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Homo sapiens | Mus musculus | Embryophyta | Bacteria | Archaea | ...
Description:
RIKEN BRC is a portal site for biological resources and associated bioinformatics tools maintained b...
Suspend
Rice Full-Length cDNA Encyclopedia DNABook
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Oryza sativa
Description:
Database maintenance site:
Rhodococcus Genome Project
Organism(s) covered:
Rhodococcus sp. strain RHA1
Description:
Rhodococcus Genome Project is the genome database for a bacteria which can break down polychlorinate...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Bacteria | Archaea | Eukaryota | Viruses
Description:
Rfam is a database of RNA sequence and structure families. The database contains information on fami...
Database maintenance site:
LBNL (Lawrence Berkeley National Laboratory)
Organism(s) covered:
Bacteria | Archaea
Description:
RegTransBase is a database of regulatory regions in prokaryotes. The database contains two sets of d...
Database maintenance site:
RIKEN Research Center for Allergy and Immunology
Organism(s) covered:
Mus musculus | Homo sapiens
Description:
RefDIC is a database of immune cell gene expression information with data from mRNA expression exper...
Suspend
RED II: Rice Expression Database II
Database maintenance site:
National Institute of Agrobiological Sciences
Organism(s) covered:
Oryza sativa
Description:
Database maintenance site:
University College Cork
Organism(s) covered:
Description:
Recode2 is a database about genes which utilize non-standard translation for gene expression purpose...
Database maintenance site:
New England Biolabs Inc.
Organism(s) covered:
Eukaryota | Bacteria | Archaea | Viruses
Description:
REBASE is a database of restriction enzymes. The database contains entries by publication authors, a...
Suspend
RARTF: RIKEN Arabidopsis Transcription Factor database
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Arabidopsis thaliana
Description:
RARTF is a database of Arabidopsis transcription factors grouped into families listed on the front p...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Homo sapiens
Description:
RAPID is a database of mutations leading to immunodeficiency diseases. It has gene and protein infor...
Suspend
RAPID: RIKEN Arabidopsis Phenome Information Database
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Arabidopsis thaliana
Description:
RAPID is a database of Arabidopsis phenotypes resulting from transposition events. Users can search ...
Database maintenance site:
CASPUR (Consorzio Interuniversitario per le Applicazioni di Supercalcolo per Universita e Ricerca)
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus
Description:
Radiation genes is a database of genes whose transcription varies in response to ionizing radiation....
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
PubChem Substance is a database of samples of chemical entities which links to the biological activi...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
PubChem Compound is a database of chemical structrues of validated small molecules. The dataase cont...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
PubChem BioAssay is a database of the biological activity characteristics of various PubChem substan...