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Server update on March 19, 2025.
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List of Database Records (records: 2170)
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Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
UniVec is a database for the identification of vector contamination in sequencing projects. The data...
Database maintenance site:
University of Minnesota
Organism(s) covered:
Bacteria | Archaea
Description:
EAWAG-BBD is a database about information on microbial biocatalytic reactions and biodegradation pat...
Database maintenance site:
UK CropNet Consortium
Organism(s) covered:
Description:
Database maintenance site:
Guru Gobind Singh Indraprastha University/University School of Biotechnology
Organism(s) covered:
Eukaryota | Bacteria
Description:
UgMicroSatdb is a database of DNA microsatellites. The database contains entries for dozens of speci...
Database maintenance site:
Iwate Medical University School of Dentistry
Organism(s) covered:
Homo sapiens
Description:
The HSG Database is a resource of information on human salivary gland proteins. The site contains da...
Database maintenance site:
JST (Japan Science and Technology Agency)
Organism(s) covered:
Homo sapiens
Description:
Tropical Medicine and Health is a database of journals published by Japanese Society of Tropical Med...
Database maintenance site:
University of Otago
Organism(s) covered:
Description:
Transterm is a database of gene transcripts and their regulatory elements. The database contains tho...
Database maintenance site:
Ohio State University
Organism(s) covered:
Mus musculus
Description:
Germline Mutagenesis Database - SB transposon is a database of mutant mice. The database contains in...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Sus scrofa
Description:
This is a viewer of Swine Linkage Map.
Two linkage map, from NIAI and USDA, were used for the analy...
Database maintenance site:
University of Tsukuba Gene Research Center
Organism(s) covered:
Solanum lycopersicum
Description:
National BioResource Project Tomato is a database of tomato resources. This database contains a toma...
Database maintenance site:
UTHealth (University of Texas Health Science Center at Houston)
Organism(s) covered:
Bacteria
Description:
The tmRDB is a database of the structures and functions of the tmRNA (earlier called "10S RNA"). Thi...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Bacillus halodurans | Bacteriophage M13 | Bordetella pertussis | Bos taurus | Carassius auratus | ...
Description:
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Archaea | Bacteria | Eukaryota
Description:
This site contains a database of a comprehensive number of bacterial and eukaryotic TMBs (trans beta...
Database maintenance site:
JCVI (J. Craig Venter Institute)
Organism(s) covered:
Embryophyta
Description:
TIGR Plant Transcript Assemblies is a database of transcript assemblies produced from EST projects. ...
Database maintenance site:
JCVI (J. Craig Venter Institute)
Organism(s) covered:
Description:
TIGRFAMs is a database of sequence alignments of protein coding sequences in multiple species. The d...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Description:
This database of THz spectroscopic measurements of several biologically relevant compounds contains ...
Database maintenance site:
Stanford University
Organism(s) covered:
Homo sapiens | Mus musculus | Drosophila melanogaster | Danio rerio
Description:
The Wnt Homepage is a database of wnt pathway information. The database contains information on wnt ...
Database maintenance site:
Indiana University
Organism(s) covered:
Bacteria | Viruses
Description:
This is a database of bacterial RNA molecules with properties of both tRNA and mRNA, which described...
Database maintenance site:
University at Albany
Organism(s) covered:
Eukaryota | Bacteria | Archaea
Description:
The RNA modification database is a integrated database of posttranscriptionally modified nucleosides...
Database maintenance site:
University of Edinburgh
Organism(s) covered:
Vertebrata
Description:
The Kidney Development Database is a resource of experimental information collected from multiple sp...
Database maintenance site:
University of Minnesota
Organism(s) covered:
Candida albicans
Description:
The Candida Albicans Physical Map Website is a portal site about Candida albicans genome and its ann...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Mus musculus
Description:
TFdb is a database of mouse transcription factors. The database contains information on known transc...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
All
Description:
Taxonomy is a database of systematic classifications of organisms repesented in public sequencing da...
Database maintenance site:
FLI (Leibniz Institute on Aging - Fritz Lipmann Institute)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
TassDB is a database of alternative gene splicing information. The database contains three different...
Database maintenance site:
Boston University
Organism(s) covered:
Anopheles gambiae | Apis mellifera | Arabidopsis thaliana | Bos taurus | Caenorhabditis briggsae | ...
Description:
TRDB is a database of repeated genetic sequences. Users can query repeat sequences, use an analysis ...
Database maintenance site:
Ohio State University
Organism(s) covered:
Arabidopsis thaliana
Description:
TAIR is a database of Arabidopsis thaliana information. The database contains genetic and molecular ...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Nicotiana tabacum
Description:
This site provides information about the results found in a collaborative project of the Laboratorie...
Database maintenance site:
SIB (Swiss Institute of Bioinformatics)
Organism(s) covered:
Homo sapiens | Mus musculus | Arabidopsis thaliana | Dictyostelium discoideum | Escherichia coli | ...
Description:
SWISS-2DPAGE is a database of proteomic information. The database contains images and identified pro...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Sus scrofa
Description:
This is a viewer of Swine DNA marker. It provides information of the primers, results of linkage map...
Database maintenance site:
Georg-August-Universitat Gottingen
Organism(s) covered:
Bacillus subtilis
Description:
SubtiWiki is a collaborative user database for the bacterium Bacillus subtilis. The database contain...
Database maintenance site:
Institut Pasteur
Organism(s) covered:
Bacillus subtilis
Description:
SubtiList is a database of the Bacillus subtilis genome. The database contains sequence and position...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
Structure is a database of three-dimensional structures of biological molecules. The database contai...
Database maintenance site:
STRING Consortium
Organism(s) covered:
Bacteria | Archaea | Eukaryota | Viruses
Description:
STRING is a database of known and predicted protein interactions, including both physical and functi...
Database maintenance site:
National Institute of Standards and Technology
Organism(s) covered:
Homo sapiens
Description:
STRBase is a database of markers for human identification. The database contains information on the ...
Database maintenance site:
Department of Biochemistry, University of Texas Health Science Center
Organism(s) covered:
Bacteria | Archaea | Eukaryota
Description:
SRPDB is a database of signal recognition particle sequences in bacteria, archaea, fungi, and plants...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
All
Description:
SRA is a database of raw sequence reads from next-generation sequencing systems. The database contai...
Database maintenance site:
California Institute of Technology
Organism(s) covered:
Echinoidea
Description:
SpBase is a database of the sea urchin genome. In addition to a genome browser, the database contain...
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Glycine max
Description:
This is a database of soybean cDNA sequences. In addition to soybean sequence information, it contai...
Database maintenance site:
River Road Bio
Organism(s) covered:
Homo sapiens
Description:
SNPedia is a database of human genetic variation. The database contains entries on DNA variations co...
Database maintenance site:
University of Miyazaki Frontier Science Research Center
Organism(s) covered:
Eukaryota
Description:
snOPY is a database of small nucleolar RNA orthology. The database contains snoRNA sequences for sev...
Database maintenance site:
EMBL (European Molecular Biology Laboratory)
Organism(s) covered:
Homo sapiens | Mus musculus | Drosophila melanogaster | Caenorhabditis elegans | Arabidopsis thaliana | ...
Description:
SMART is a database of protein domains found in several different protein classes. The database cont...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Eukaryota
Description:
This site offers the tabulated information of the GPCR (G-protein coupled receptor) genes of 56 euka...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Rattus norvegicus
Description:
Rat Strain List is a database of rat resources maintained by RIKEN BioResource Center (RIKEN BRC). E...
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Schizosaccharomyces pombe
Description:
This is a database of gene information in Schizosaccharomyces pombe. The database contains informati...
Database maintenance site:
Wellcome Sanger Institute
Organism(s) covered:
Bacteria | Eukaryota | Viruses
Description:
Wellcome Trust Sanger Institute is a major European research program. The website contains informati...
Database maintenance site:
NARO (National Agriculture and Food Research Organization)
Organism(s) covered:
Oryza sativa
Description:
The SALAD database supports the construction of dendrograms from amino acid sequence similarities in...
Database maintenance site:
RIKEN Tsukuba Institute
Organism(s) covered:
Arabidopsis thaliana | Thellungiella halophila | Nicotiana tabacum | Manihot esculenta | Populus nigra | ...
Description:
SABRE is a database of plant resources. The database contains collected information about Arabidopsi...
Database maintenance site:
Gesellschaft fur Biotechnologische Forschung
Organism(s) covered:
Eukaryota
Description:
S/MARt DB is a database of cellular scaffolds and matrix data. The database contains scaffold, matri...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Populus
Description:
RPOPDB is a Populus genome sequence resource with genome browser and search functions to explore the...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Mus musculus
Description:
ROUGE is a database of long rodent cDNA clones designed to compliment the HUGE database of long huma...