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List of Database Records (records: 2170)
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Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Manihot esculenta
Description:
This is a database of cassava cDNA clones with 5' and 3' sequence information for each clone. Users ...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Description:
This site is a database of structures, functions and functional networks of proteins researched by R...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Mus musculus
Description:
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Description:
RIKEN Hub Database is an integrated database of data resources published by RIKEN. Thid database con...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Arabidopsis thaliana | Physcomitrella patens | Manihot esculenta | Populus | Nicotiana tabacum | ...
Description:
This is a tool for BLAST searching multiple plant species. The website contains a sequence input win...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Description:
JCM is a database of cultured microbial strains and their genomic DNA samples maintained by RIKEN Bi...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Homo sapiens | Rattus norvegicus | Mus musculus | Macaca fuscata | Pan troglodytes
Description:
RIKEN BRC DNA BANK is a database of cloned DNA, vector and recombinant adenovirus resources maintain...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus | Cricetulus griseus | Mesocricetus auratus | ...
Description:
Cell Search System is a database of cultured cell lines derived from animal and human tissues mainta...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Arabidopsis thaliana
Description:
Arabidopsis activation (T-DNA)-tagged lines is a database of T-DNA-tagged Arabidopsis plants maintai...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Homo sapiens | Mus musculus | Embryophyta | Bacteria | Archaea | ...
Description:
RIKEN BRC is a portal site for biological resources and associated bioinformatics tools maintained b...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Arabidopsis thaliana
Description:
This database of Arabidopsis mutant lines contains several hundred mutant T1 lines with visible phen...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Oryza sativa
Description:
Database maintenance site:
Rhodococcus Genome Project
Organism(s) covered:
Rhodococcus sp. strain RHA1
Description:
Rhodococcus Genome Project is the genome database for a bacteria which can break down polychlorinate...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Mus musculus
Description:
RIKEN ENU-based gene-driven mutagenesis is a collection of information on the ENU-based gene-driven ...
Database maintenance site:
EMBL-EBI (European Bioinformatics Institute)
Organism(s) covered:
Bacteria | Archaea | Eukaryota | Viruses
Description:
Rfam is a database of RNA sequence and structure families. The database contains information on fami...
Database maintenance site:
LBNL (Lawrence Berkeley National Laboratory)
Organism(s) covered:
Bacteria | Archaea
Description:
RegTransBase is a database of regulatory regions in prokaryotes. The database contains two sets of d...
Database maintenance site:
RIKEN Research Center for Allergy and Immunology
Organism(s) covered:
Mus musculus | Homo sapiens
Description:
RefDIC is a database of immune cell gene expression information with data from mRNA expression exper...
Database maintenance site:
National Institute of Agrobiological Sciences
Organism(s) covered:
Oryza sativa
Description:
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Viruses
Description:
RVD is a database of sequence and functional information about recombinant viruses generated, in par...
Database maintenance site:
University College Cork
Organism(s) covered:
Description:
Recode2 is a database about genes which utilize non-standard translation for gene expression purpose...
Database maintenance site:
New England Biolabs Inc.
Organism(s) covered:
Eukaryota | Bacteria | Archaea | Viruses
Description:
REBASE is a database of restriction enzymes. The database contains entries by publication authors, a...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Arabidopsis thaliana
Description:
RARTF is a database of Arabidopsis transcription factors grouped into families listed on the front p...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Homo sapiens
Description:
RAPID is a database of mutations leading to immunodeficiency diseases. It has gene and protein infor...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Arabidopsis thaliana
Description:
RAPID is a database of Arabidopsis phenotypes resulting from transposition events. Users can search ...
Database maintenance site:
CASPUR (Consorzio Interuniversitario per le Applicazioni di Supercalcolo per Universita e Ricerca)
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus
Description:
Radiation genes is a database of genes whose transcription varies in response to ionizing radiation....
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
PubChem Substance is a database of samples of chemical entities which links to the biological activi...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
PubChem Compound is a database of chemical structrues of validated small molecules. The dataase cont...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
PubChem BioAssay is a database of the biological activity characteristics of various PubChem substan...
Database maintenance site:
University of Pennsylvania
Organism(s) covered:
Saccharomyces cerevisiae
Description:
PTM-Switchboard is a database of known cases of TF-PTMs affecting gene transcriptions. This database...
Database maintenance site:
Simon Fraser University
Organism(s) covered:
Pseudomonas
Description:
Pseudomonas Genome Database is a resource for the completed genome projects of several Pseudomonas s...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
Protein Clusters is a database of related protein families. The database contains clustered protein ...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
All
Description:
NCBI Protein is a collection of amino acid sequences from several sources, including translations fr...
Database maintenance site:
Goteborgs universitet
Organism(s) covered:
Saccharomyces cerevisiae
Description:
PROPHECY is a database of mutant yeast phenotypes. The database contains information on the growth r...
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Description:
Standard Spectrum Search is a database of metabolite NMR spectra. The database consists of dozens of...
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Description:
SpinAssign is a tool for annotating 2D 13C-HSQC NMR peaks. The site allows users to input peaks that...
Database maintenance site:
RIKEN CSRS (RIKEN Center for Sustainable Resource Science)
Organism(s) covered:
Description:
PRIMe is a database of metabolomics and transcriptomics with several tools for metabolomic research,...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Pan troglodytes
Description:
PRIGEN is a database of chimpanzee cDNA sequences. The database contains sequences from several tiss...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Zinnia violacea
Description:
This database contains information on the way genes are expressed in plants like Zinnia elegans and ...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Homo sapiens
Description:
This website shows how different human proteins interact with one another.
Information on 32,198 hum...
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Description:
PosMed is a database connecting data of several types, with information about associations between g...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Porphyra yezoensis
Description:
This is a database of Porphyra yezoensis expressed sequences containing consensus gene sequences and...
Database maintenance site:
NCBI (National Center for Biotechnology Information)
Organism(s) covered:
Description:
Popset is a database of collected sequences which have been used to determine phylogenetic relation ...
Database maintenance site:
RIKEN BRC (RIKEN BioResource Research Center)
Organism(s) covered:
Populus
Description:
This is a database of Poplar cDNA clones with 5' and 3' sequence information for each clone. Users c...
Database maintenance site:
The University of Tennessee Health Science Center
Organism(s) covered:
Homo sapiens | Mus musculus | Mus musculus
Description:
PolymiRTS is a database of DNA variations which occur naturally in predicted and experimentally iden...
Database maintenance site:
Michigan State University
Organism(s) covered:
Embryophyta
Description:
Plant Repeat Databases is a collection of DNA sequence repeats found in plants. The database consist...
Database maintenance site:
The University of Tokyo The Institute of Medical Science
Organism(s) covered:
Description:
PiSITE is a database of protein interaction domain information containing protein structures annotat...
Database maintenance site:
BGI (Beijing Genomics Institute)
Organism(s) covered:
Sus scrofa
Description:
PigGIS is a database of the pig genome that allows users to browse and search the genome, providing ...
Database maintenance site:
University hospital Medical Information Network
Organism(s) covered:
Homo sapiens
Description:
PicSNP is a database of single nucleotide mutations in the human genome that collects non-synonymous...
Database maintenance site:
Teikyo University Institute of Medical Mycology
Organism(s) covered:
Fungi
Description:
PFDB is a database of research and educational resources related to pathogenic fungi. This database ...
Database maintenance site:
Yamaguchi University Faculty of Science
Organism(s) covered:
Description:
Petri Net Pathways is a database containing models of animated biological pathways.
They are also ex...