Database Record
EM Navigator: 3D Electron Microscopy (3D-EM) Data Navigator
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC00767 |
|---|---|
| Database nameName of the database | EM Navigator |
| Alternative nameAlternative name of the database | 3D Electron Microscopy (3D-EM) Data Navigator |
| URLURL of the database | http://pdbj.org/emnavi/?&lang=en |
| Database maintenance siteSite maintaining the database | Osaka University Institute for Protein Research (Link to J-Global) |
| Country/RegionCountry or region name where the database maintenance site is located | Japan |
| Database descriptionDatabase descirption | EM Navigator is a web site to browse 3D electron microscopy (3D-EM) data of biological molecules and assemblies, based on EMDB and PDB data for beginners, non-specialists, and experts in 3D-EM or structural/molecular biology. Each entry contains interactive 3D images and associated information such as a summary, literature, experiment methods, slice data, etc. |
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | ― |
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
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| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
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| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database | ― |
| Language(s)Languages in which the contents of the database are displayed | Japanese, English |
| Operational statusOperational status for the database | Active |
| Link(s) to Downloadable dataLinks to downloadable data | ― |
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ― |
| Link(s) to Terms of useLinks to terms of use of downloadable data | ― |
| Link(s) to "How to use" | ― |
| Contact information of database | ― |
| Link(s) to API / SPARQL endpoint | ― |
| Link to LSDB ArchiveLink to LSDB Archive | ― |
| Link to MEDALS Database listLink to MEDALS Database list | ― |
| Link to TogoTVLink to TogoTV | ― |
| Link to FAIRsharingLink to FAIRsharing | ― |
| Similar databasesDatabases that are similar to this database. | |
| Record maintainerRecord maintainer | Integbio Database Catalog |
| Record sourceOrganization that originally created the record |
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| Date of creation of this recordDate of creation of this English record | 2013-06-17 |
| Last update date of this recordLast update date of this English record | 2015-07-17 |
| Record license | Creative Commons CC0 license |