List of Database Records (records: 2197)
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Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
Allie Portal is a portal site of Allie; an online search service for abbreviations and long forms in...
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HLA DB: HLA database
Database maintenance site:
NBDC (Japan Science and Technology Agency Department of NBDC Program)
Organism(s) covered:
Homo sapiens
Description:
HLA DB is a database of disease and haplotype information for the human HLA region. The database con...
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Human Variation DB: human genome variation database
Database maintenance site:
NBDC (Japan Science and Technology Agency Department of NBDC Program)
Organism(s) covered:
Homo sapiens
Description:
Human Variation Database is a collection of data regarding genomic variation. It contains variation ...
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CNV association DB: copy number variation association database
Database maintenance site:
NBDC (Japan Science and Technology Agency Department of NBDC Program)
Organism(s) covered:
Homo sapiens
Description:
The CNV Association database is a portal site for exploring associations between CNVs and disease. C...
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CNV control DB: copy number variation database
Database maintenance site:
NBDC (Japan Science and Technology Agency Department of NBDC Program)
Organism(s) covered:
Homo sapiens
Description:
The CNV Control database hosts copy number data deposited and collected from published studies. The ...
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SNP control database
Database maintenance site:
NBDC (Japan Science and Technology Agency Department of NBDC Program)
Organism(s) covered:
Homo sapiens
Description:
The SNP Control database is a collection of data from a large number of individuals. The data can be...
Database maintenance site:
Kyoto University Institute for Chemical Research Bioinformatics Center
Organism(s) covered:
Homo sapiens
Description:
KEGG MEDICUS is an integrated database of diseases, drugs and other health-related substances. KEGG ...
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Metagenome.jp (Human Meta BodyMap)
Database maintenance site:
Tokyo Institute of Technology
Organism(s) covered:
Homo sapiens | Bacteria
Description:
The Metagenome Database is a database of sequence information from microbial sequencing projects. Th...
Database maintenance site:
Stanford Center for Biomedical Informatics Research
Organism(s) covered:
Bacteria
Description:
MEO is a repository of ontology describing microbial habitats maintained by Tokyo Institute of Techn...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Bacteria | Archaea
Description:
Microbiome Datahub is an international microbiome database focusing on microbiome research. It colle...
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BioLOD.org: Biophenome Linked Open Databases
Database maintenance site:
RIKEN Yokohama Institute
Organism(s) covered:
Description:
BioLOD.org is an integrated database of biological open data based on semantic web technology standa...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Description:
Metabolomics.JP is a portal site for metabolomics information maintained by Arita Laboratory, Nation...
Database maintenance site:
Nara Institute of Science and Technology Graduate School of Information Science
Organism(s) covered:
Description:
The Metabolite Activity database collects information on how metabolites affect various organisms. T...
Database maintenance site:
The Noguchi Institute
Organism(s) covered:
Description:
GlycoNAVI is a web site for carbohydrate research. It consist of the 'GlycoNAVI DataBase' for molecu...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
JCGGDB Report is a collection of minireviews about the latest information for passways and the glyco...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
KOmouseDB is a collection of phenotype information of mice which have knockouts in genes relevant fo...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Homo sapiens
Description:
GDGDB is a database of the disease caused by mutations of glycan-related genes (glycosyltransferases...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
JMSDB is a database of monosaccharide structures. The database contains the formula, name, and sever...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
TuMaRdb is a database of tumor biomarkers: molecular entities and diseases they have been linked to....
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
GlycoPOD is a collection of protocols for performing experiments on glycans. The database contains p...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
PACDB is a curated database of pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carboh...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
This is a database of detailed information about sugar chains, with structure information cross-link...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
This site is a search tool of JCGGDB which is a database of glycan-related data in Japan. It allows ...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
PREIMS is a database containing various experimental protocols, which have been developed during the...
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AT Atlas: Advanced Technologies Atlas
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Description:
AT Atlas is a comprehensive database for achievements by research groups of "Protein Production", "S...
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TP Atlas: Targeted Proteins Atlas
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Homo sapiens
Description:
TP Atlas is a comprehensive database for achievements of Targeted Proteins Research Program which in...
Database maintenance site:
Targeted Proteins Research Program
Organism(s) covered:
Description:
TP Structure Gallery is a list of three-dimensional structures of proteins which were analyzed in th...
Database maintenance site:
Targeted Proteins Research Program
Organism(s) covered:
Description:
List of TP Press Release on Research is a portal list of press releases and literature information a...
Database maintenance site:
Kyoto University Graduate School of Medicine Congenital Anomaly Research Center
Organism(s) covered:
Homo sapiens
Description:
Kyoto Human Embryo Visualization Project is a database collecting 2D and reconstructed 3D images of ...
Database maintenance site:
Keio University Faculty of Science and Technology
Organism(s) covered:
Ciona intestinalis | Halocynthia roretzi | Botryllus schlosseri | Phallusia mammillata | Ciona savignyi | ...
Description:
ACBD is a database of compounds and small molecules that have been shown to affect Ciona intestinali...
Database maintenance site:
Keio University Faculty of Science and Technology
Organism(s) covered:
Ciona intestinalis
Description:
3DPL is a database of the spatial and temporal localization of proteins in Ciona intestinalis. The d...
Database maintenance site:
Chiba University Graduate School of Advanced Integration Science Nanoscience
Organism(s) covered:
Ciona intestinalis
Description:
CiAID is a database of RNA expression profiles of Ciona intestinalis. It contains in situ hybridizat...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
DASH is a database of structural alignments for all known structurally homologous protein domains an...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
Sequence Navigator is a portal site to PDBj that uses BLAST to search for protein structures. The da...
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GIB-IS: Genome Information Broker for Insertion sequence
Database maintenance site:
Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered:
Bacteria
Description:
GIB-IS is a database of bacterial insertion sequences. It contains annotated IS determined from DDBJ...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
Suspend
GTPS: Gene Trek in Prokaryote Space
Database maintenance site:
Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered:
Archaea | Bacteria
Description:
GTPS is a database of prokaryotic genome sequences performed re-annotation. This database contains c...
Database maintenance site:
NITE (National Institute of Technology and Evaluation)
Organism(s) covered:
Streptomyces | Bacteria
Description:
Successful development of new drugs often relies on information about secondary metabolites produced...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
This site contains a database of protein-ligand binding sites that have been compared and numbered a...
Database maintenance site:
Tokyo Medical and Dental University
Organism(s) covered:
Homo sapiens
Description:
This database is called MCG CNV and provides copy number variant (CNV) and loss of heterozygosity (L...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Cimex lectularius
Description:
ClEST is a database of bedbug (Cimex lectularius) ESTs and clusters archived in Life Science Databas...
Database maintenance site:
NIMH (National Institute of Mental Health)
Organism(s) covered:
Mus musculus
Description:
Database maintenance site:
Kyoto University Graduate School of Science
Organism(s) covered:
Dugesia japonica
Description:
Plabrain DB is a database for analysis of planarian nervous system archived in Life Science Database...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Description:
TargetMine is a data warehouse system for assisting drug discovery. It integrates biological data fo...
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kusarinoko: Search SRA Entries with PubMed Article
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
Kusarinoko is a database of sequencing metadata. The database contains publicly available data for n...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
GGRNA is a database and a Google-like full text search engine for genes and transcripts of 13 specie...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
Gendoo is a database and a search system for diseases, drugs, biological phenomena and anatomy assoc...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus
Description:
RefEx is a reference database of gene expression profiles in normal mammalian tissues. RefEx contain...
Database maintenance site:
Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered:
All
Description:
DRA is a repository for raw output data from next-generation sequencers maintained by DDBJ (DNA Data...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
OReFiL is a database and a search system for online life science resources (databases, tools and web...