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List of Database Records (records: 2182)
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Database maintenance site:
Nara Institute of Science and Technology Graduate School of Information Science
Organism(s) covered:
Description:
The Metabolite Activity database collects information on how metabolites affect various organisms. T...
Database maintenance site:
The Noguchi Institute
Organism(s) covered:
Description:
GlycoNAVI is a web site for carbohydrate research. It consist of the 'GlycoNAVI DataBase' for molecu...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
JCGGDB Report is a collection of minireviews about the latest information for passways and the glyco...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
KOmouseDB is a collection of phenotype information of mice which have knockouts in genes relevant fo...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Homo sapiens
Description:
GDGDB is a database of the disease caused by mutations of glycan-related genes (glycosyltransferases...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
JMSDB is a database of monosaccharide structures. The database contains the formula, name, and sever...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
TuMaRdb is a database of tumor biomarkers: molecular entities and diseases they have been linked to....
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
GlycoPOD is a collection of protocols for performing experiments on glycans. The database contains p...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
PACDB is a curated database of pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carboh...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
This is a database of detailed information about sugar chains, with structure information cross-link...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
This site is a search tool of JCGGDB which is a database of glycan-related data in Japan. It allows ...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
PREIMS is a database containing various experimental protocols, which have been developed during the...
Suspend
AT Atlas: Advanced Technologies Atlas
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Description:
AT Atlas is a comprehensive database for achievements by research groups of "Protein Production", "S...
Suspend
TP Atlas: Targeted Proteins Atlas
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Homo sapiens
Description:
TP Atlas is a comprehensive database for achievements of Targeted Proteins Research Program which in...
Database maintenance site:
Targeted Proteins Research Program
Organism(s) covered:
Description:
TP Structure Gallery is a list of three-dimensional structures of proteins which were analyzed in th...
Database maintenance site:
Targeted Proteins Research Program
Organism(s) covered:
Description:
List of TP Press Release on Research is a portal list of press releases and literature information a...
Database maintenance site:
Kyoto University Graduate School of Medicine Congenital Anomaly Research Center
Organism(s) covered:
Homo sapiens
Description:
Kyoto Human Embryo Visualization Project is a database collecting 2D and reconstructed 3D images of ...
Database maintenance site:
Keio University Faculty of Science and Technology
Organism(s) covered:
Ciona intestinalis | Halocynthia roretzi | Botryllus schlosseri | Phallusia mammillata | Ciona savignyi | ...
Description:
ACBD is a database of compounds and small molecules that have been shown to affect Ciona intestinali...
Database maintenance site:
Keio University Faculty of Science and Technology
Organism(s) covered:
Ciona intestinalis
Description:
3DPL is a database of the spatial and temporal localization of proteins in Ciona intestinalis. The d...
Database maintenance site:
Chiba University Graduate School of Advanced Integration Science Nanoscience
Organism(s) covered:
Ciona intestinalis
Description:
CiAID is a database of RNA expression profiles of Ciona intestinalis. It contains in situ hybridizat...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
DASH is a database of structural alignments for all known structurally homologous protein domains an...
Database maintenance site:
Osaka University Institute for Protein Research
Organism(s) covered:
Description:
Sequence Navigator is a portal site to PDBj that uses BLAST to search for protein structures. The da...
Suspend
GIB-IS: Genome Information Broker for Insertion sequence
Database maintenance site:
Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered:
Bacteria
Description:
GIB-IS is a database of bacterial insertion sequences. It contains annotated IS determined from DDBJ...
Database maintenance site:
National Institute of Genetics
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
Suspend
GTPS: Gene Trek in Prokaryote Space
Database maintenance site:
Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered:
Archaea | Bacteria
Description:
GTPS is a database of prokaryotic genome sequences performed re-annotation. This database contains c...
Database maintenance site:
NITE (National Institute of Technology and Evaluation)
Organism(s) covered:
Streptomyces | Bacteria
Description:
Successful development of new drugs often relies on information about secondary metabolites produced...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Description:
This site contains a database of protein-ligand binding sites that have been compared and numbered a...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Description:
Kazusa Molecular Formula Searcher (MFSearcher) is a RESTful Web service that provides researchers wi...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus | Arabidopsis thaliana
Description:
This is a database of nucleotide sequences of ESTs, cDNAs and oligo DNA microarray probes for Lotus ...
Database maintenance site:
Tokyo Medical and Dental University
Organism(s) covered:
Homo sapiens
Description:
This database is called MCG CNV and provides copy number variant (CNV) and loss of heterozygosity (L...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus
Description:
FuLoJa stands for Lotus japonicus Full-length cDNA Databases and includes full-length cDNA sequences...
Database maintenance site:
RIKEN (The Institute of Physical and Chemical Research)
Organism(s) covered:
Homo sapiens | Mus musculus
Description:
SSBC is a database about structures and functions of proteins elucidated at "National Project on Pro...
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Cimex lectularius
Description:
ClEST is a database of bedbug (Cimex lectularius) ESTs and clusters archived in Life Science Databas...
Database maintenance site:
NIMH (National Institute of Mental Health)
Organism(s) covered:
Mus musculus
Description:
Database maintenance site:
Kyoto University Graduate School of Science
Organism(s) covered:
Dugesia japonica
Description:
Plabrain DB is a database for analysis of planarian nervous system archived in Life Science Database...
Database maintenance site:
National Institutes of Biomedical Innovation, Health and Nutrition
Organism(s) covered:
Description:
TargetMine is a data warehouse system for assisting drug discovery. It integrates biological data fo...
Suspend
kusarinoko: Search SRA Entries with PubMed Article
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
Kusarinoko is a database of sequencing metadata. The database contains publicly available data for n...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
GGRNA is a database and a Google-like full text search engine for genes and transcripts of 13 specie...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
Gendoo is a database and a search system for diseases, drugs, biological phenomena and anatomy assoc...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Homo sapiens | Mus musculus | Rattus norvegicus
Description:
RefEx is a reference database of gene expression profiles in normal mammalian tissues. RefEx contain...
Database maintenance site:
Bioinformation and DDBJ Center, National Institute of Genetics, Research Organization of Information and Systems
Organism(s) covered:
All
Description:
DRA is a repository for raw output data from next-generation sequencers maintained by DDBJ (DNA Data...
Database maintenance site:
DBCLS (Database Center for Life Science, Research Organization of Information and Systems)
Organism(s) covered:
Description:
OReFiL is a database and a search system for online life science resources (databases, tools and web...
Database maintenance site:
NBDC (Japan Science and Technology Agency Department of NBDC Program)
Organism(s) covered:
Description:
Life Science Database Cross Search is a data set collection and a cross search system for life scien...
Database maintenance site:
NBDC (Japan Science and Technology Agency Department of NBDC Program)
Organism(s) covered:
Description:
NBDC Portal is a portal site for databases and web tools in life science, developed by Department of...
Suspend
UCSC GenomeBrowser for Functional RNA
Database maintenance site:
AIST (National Institute of Advanced Industrial Science and Technology)
Organism(s) covered:
Mus musculus | Rattus norvegicus | Drosophila melanogaster | Caenorhabditis elegans | Aspergillus oryzae | ...
Description:
Database maintenance site:
Nara Institute of Science and Technology
Organism(s) covered:
Embryophyta | Homo sapiens | Arabidopsis | Bacillus
Description:
This database provides information on how species and metabolites relate to each other as does the s...
Database maintenance site:
Keio University
Organism(s) covered:
Escherichia coli
Description:
This database contains multi-omics data of Escherichia coli, a model organism. Data was gathered und...
Database maintenance site:
The University of Tokyo Research Center for Advanced Science and Technology
Organism(s) covered:
Homo sapiens
Description:
RefExA is a reference database for gene expression analysis. Search terms include Genbank accession,...
Database maintenance site:
NITE (National Institute of Technology and Evaluation)
Organism(s) covered:
Description:
NITE Chemical Risk Information Platform (NITE-CHRIP) is a database provided free of charge
over the ...
Database maintenance site:
Kazusa DNA Research Institute
Organism(s) covered:
Lotus japonicus
Description:
This database contains 98838 EST and 3488 full-length cDNA sequences of Lotus. japonicus, a model le...