Database Record
Inactive
PRIDE: PSC-RIKEN Database of EST/Gene Expression
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC00630 |
|---|---|
| Database nameName of the database | PRIDE |
| Alternative nameAlternative name of the database | PSC-RIKEN Database of EST/Gene Expression |
| URLURL of the database | http://mrg.psc.riken.go.jp/PRIDE/index.html |
| Database maintenance siteSite maintaining the database | RIKEN Yokohama Institute (Link to J-Global) |
| Country/RegionCountry or region name where the database maintenance site is located | Japan |
| Database descriptionDatabase descirption | This database contains information on the way genes are expressed in plants like Zinnia elegans and also its EST's. This information was collected by applying a tool called Silicon genetics (genet). It is planned to add the same data for other organisms, for instance Arabidopsis, Lotus japonica and BY-2 in the future. A Blast search option is provided. |
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | Zinnia violacea (34245) |
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
|
| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
|
| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database | ― |
| Language(s)Languages in which the contents of the database are displayed | English |
| Operational statusOperational status for the database | Inactive |
| Link(s) to Downloadable dataLinks to downloadable data | ― |
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ― |
| Link(s) to Terms of useLinks to terms of use of downloadable data | ― |
| Link(s) to "How to use" | ― |
| Contact information of database | ― |
| Link(s) to API / SPARQL endpoint | ― |
| Link to LSDB ArchiveLink to LSDB Archive | ― |
| Link to MEDALS Database listLink to MEDALS Database list | ― |
| Link to TogoTVLink to TogoTV | ― |
| Link to FAIRsharingLink to FAIRsharing | ― |
| Similar databasesDatabases that are similar to this database. | |
| Record maintainerRecord maintainer | Integbio Database Catalog |
| Record sourceOrganization that originally created the record |
|
| Date of creation of this recordDate of creation of this English record | 2013-06-17 |
| Last update date of this recordLast update date of this English record | 2013-06-17 |
| Record license | Creative Commons CC0 license |