Database Record
Plabrain DB: Planarian Brain Database
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC01108 | ||||||||||||||||||||||||
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| Database nameName of the database | Plabrain DB | ||||||||||||||||||||||||
| Alternative nameAlternative name of the database | Planarian Brain Database | ||||||||||||||||||||||||
| URLURL of the database | https://dbarchive.biosciencedbc.jp/en/plabrain-db/desc.html | ||||||||||||||||||||||||
| Database maintenance siteSite maintaining the database | Kyoto University Graduate School of Science (Link to J-Global) | ||||||||||||||||||||||||
| Country/RegionCountry or region name where the database maintenance site is located | Japan | ||||||||||||||||||||||||
| Database descriptionDatabase descirption | Plabrain DB is a database for analysis of planarian nervous system archived in Life Science Database Archive. Plabrain DB includes FACS-based single-cell PCR data and images of the gene expression analysis by whole-mount in situ hybridization and Immunohistochemical staining. Users can search images and PCR data of planarians by keywords, and download selected data as a CSV file. | ||||||||||||||||||||||||
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | Dugesia japonica (6161) | ||||||||||||||||||||||||
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
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| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
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| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database |
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| Language(s)Languages in which the contents of the database are displayed | Japanese, English | ||||||||||||||||||||||||
| Operational statusOperational status for the database | Active | ||||||||||||||||||||||||
| Link(s) to Downloadable dataLinks to downloadable data | https://dbarchive.biosciencedbc.jp/en/plabrain-db/download.html | ||||||||||||||||||||||||
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | https://dbarchive.biosciencedbc.jp/en/plabrain-db/download.html | ||||||||||||||||||||||||
| Link(s) to Terms of useLinks to terms of use of downloadable data | https://dbarchive.biosciencedbc.jp/en/plabrain-db/lic.html | ||||||||||||||||||||||||
| Link(s) to "How to use" | ― | ||||||||||||||||||||||||
| Contact information of database | ― | ||||||||||||||||||||||||
| Link(s) to API / SPARQL endpoint | ― | ||||||||||||||||||||||||
| Link to LSDB ArchiveLink to LSDB Archive | https://dbarchive.biosciencedbc.jp/en/plabrain-db/desc.html | ||||||||||||||||||||||||
| Link to MEDALS Database listLink to MEDALS Database list | ― | ||||||||||||||||||||||||
| Link to TogoTVLink to TogoTV | ― | ||||||||||||||||||||||||
| Link to FAIRsharingLink to FAIRsharing | ― | ||||||||||||||||||||||||
| Similar databasesDatabases that are similar to this database. | |||||||||||||||||||||||||
| Record maintainerRecord maintainer | Integbio Database Catalog | ||||||||||||||||||||||||
| Record sourceOrganization that originally created the record |
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| Date of creation of this recordDate of creation of this English record | 2013-06-17 | ||||||||||||||||||||||||
| Last update date of this recordLast update date of this English record | 2022-01-16 | ||||||||||||||||||||||||
| Record license | Creative Commons CC0 license |