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Haemosphere

IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. NBDC02532
Database nameName of the database Haemosphere
Alternative nameAlternative name of the database ―
URLURL of the database http://haemosphere.org
Database maintenance siteSite maintaining the database The Walter and Eliza Hall Institute of Medical Research
Country/RegionCountry or region name where the database maintenance site is located Australia
Database descriptionDatabase descirption Haemosphere is a data portal for RNA-Seq datasets, including each celltype of the dataset, cell_lineage, tissue, treatment, immunophenotype, species, and strain, etc. It contains Haemopedia datasets providing from Walter and Eliza Hall Institute and some other key datasets of interest to the haematopoiesis community. Users can search for genes of interest, view their expression profiles across a range of cell types within a dataset, perform differential expression analyses and manage gene sets easily.
Organism(s) coveredNCBI Taxonomy names and IDs covered by the database Homo sapiens (9606), Mus musculus (10090)
Tag - TargetTag to indicate targets for this database such as genome and protein
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
Tag - Information typeTag to indicate information types for this database such as sequence and structure
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database
PubMed ID:30395284
DOI:10.1093/nar/gky1020
PubMed ID:27499199
DOI:10.1016/j.stemcr.2016.07.007
PubMed ID:29617932
DOI:10.1093/bioinformatics/bty207
Language(s)Languages in which the contents of the database are displayed English
Operational statusOperational status for the database Active
Link(s) to Downloadable dataLinks to downloadable data https://haemosphere.org/datasets/show
Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data ―
Link(s) to Terms of useLinks to terms of use of downloadable data ―
Link(s) to "How to use" ―
Contact information of database admin@haemosphere.org
Link(s) to API / SPARQL endpoint ―
Link to LSDB ArchiveLink to LSDB Archive ―
Link to MEDALS Database listLink to MEDALS Database list ―
Link to TogoTVLink to TogoTV ―
Link to FAIRsharingLink to FAIRsharing ―
Similar databasesDatabases that are similar to this database.
Record maintainerRecord maintainer Integbio Database Catalog
Record sourceOrganization that originally created the record
Date of creation of this recordDate of creation of this English record 2020-05-27
Last update date of this recordLast update date of this English record 2020-05-27
Record license Creative Commons CC0 license