Database Record
Exp-Plant Catalog: RIKEN BRC Experimental Plant Web Catalog
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC02632 |
|---|---|
| Database nameName of the database | Exp-Plant Catalog |
| Alternative nameAlternative name of the database | RIKEN BRC Experimental Plant Web Catalog |
| URLURL of the database | https://plant.rtc.riken.jp/resource/home/index.html |
| Database maintenance siteSite maintaining the database | Experimental Plant Division, RIKEN BioResource Research Center (Link to J-Global) |
| Country/RegionCountry or region name where the database maintenance site is located | Japan |
| Database descriptionDatabase descirption | Exp-Plant Catalog is a database of plant bio-resource information in the stock of Experimental Plant Division of RIKEN BioResource Research Center (BRC). It contains seeds, DNA resources (RAFL clone, TF clone, TAC clone) and cell lines about model plants such as Arabidopsis thaliana, Brachypodium distachyon, Brassica rapa etc.. It allows to search using resource lists or keywords (BRC No, Cell Line, Plant Name, Culture type, origin). |
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | Arabidopsis thaliana (3702), Brachypodium distachyon (15368), Populus nigra (3691), Oryza sativa (4530), Lotus japonicus (34305), Solanum lycopersicum (4081), Striga hermonthica (68872), Nicotiana (4085), Brassica rapa (3711), Thellungiella halophila (98038), Physcomitrium patens (3218), Manihot esculenta (3983) |
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
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| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
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| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database | ― |
| Language(s)Languages in which the contents of the database are displayed | English |
| Operational statusOperational status for the database | Active |
| Link(s) to Downloadable dataLinks to downloadable data | ― |
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ― |
| Link(s) to Terms of useLinks to terms of use of downloadable data | ― |
| Link(s) to "How to use" | ― |
| Contact information of database | https://plant.rtc.riken.jp/resource/contact/contact_e.html |
| Link(s) to API / SPARQL endpoint | ― |
| Link to LSDB ArchiveLink to LSDB Archive | ― |
| Link to MEDALS Database listLink to MEDALS Database list | ― |
| Link to TogoTVLink to TogoTV | ― |
| Link to FAIRsharingLink to FAIRsharing | ― |
| Similar databasesDatabases that are similar to this database. |
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| Record maintainerRecord maintainer | Integbio Database Catalog |
| Record sourceOrganization that originally created the record |
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| Date of creation of this recordDate of creation of this English record | 2024-03-22 |
| Last update date of this recordLast update date of this English record | 2024-03-22 |
| Record license | Creative Commons CC0 license |