Database Record
Inactive
dbAMP
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC02467 | ||||
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| Database nameName of the database | dbAMP | ||||
| Alternative nameAlternative name of the database | ― | ||||
| URLURL of the database | http://140.138.77.240/~dbamp/index.php | ||||
| Database maintenance siteSite maintaining the database | Arieh Warshel Institute of Computational Biology, The Chinese University of Hong Kong | ||||
| Country/RegionCountry or region name where the database maintenance site is located | China | ||||
| Database descriptionDatabase descirption | dbAMP is a database of anti-microbial peptides (AMPs) which are naturally encoded by genes and generally containing 12-100 amino acids. It provides information of antibacterial activities, physical-chemical properties, target species, structures, interacting proteins, links to external databases etc. It includes two categories of AMPs: experimental AMPs from published articles or public databases and predicted AMPs from public databases. Users can browse using following keys; peptide sequences, organisms, structures, targets and references. | ||||
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | Archaea (2157), Bacteria (2), Fungi (4751), Embryophyta (3193), Homo sapiens (9606), Hexapoda (6960), Amphibia (8292), Arthropoda (6656), Vertebrata (7742), Mollusca (6447), Eukaryota (2759), Viruses (10239) | ||||
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
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| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
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| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database |
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| Language(s)Languages in which the contents of the database are displayed | English | ||||
| Operational statusOperational status for the database | Inactive | ||||
| Link(s) to Downloadable dataLinks to downloadable data | http://140.138.77.240/~dbamp/download.php | ||||
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | http://140.138.77.240/~dbamp/download.php | ||||
| Link(s) to Terms of useLinks to terms of use of downloadable data | http://140.138.77.240/~dbamp/download/LICENSE | ||||
| Link(s) to "How to use" | http://140.138.77.240/~dbamp/tutorial.php | ||||
| Contact information of database | http://140.138.77.240/~dbamp/index.php | ||||
| Link(s) to API / SPARQL endpoint | ― | ||||
| Link to LSDB ArchiveLink to LSDB Archive | ― | ||||
| Link to MEDALS Database listLink to MEDALS Database list | ― | ||||
| Link to TogoTVLink to TogoTV | ― | ||||
| Link to FAIRsharingLink to FAIRsharing | ― | ||||
| Similar databasesDatabases that are similar to this database. |
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| Record maintainerRecord maintainer | Integbio Database Catalog | ||||
| Record sourceOrganization that originally created the record |
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| Date of creation of this recordDate of creation of this English record | 2019-10-09 | ||||
| Last update date of this recordLast update date of this English record | 2020-10-04 | ||||
| Record license | Creative Commons CC0 license |