Database Record
Database of local DNA conformers: Dolce
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC02181 | ||||
|---|---|---|---|---|---|
| Database nameName of the database | Database of local DNA conformers | ||||
| Alternative nameAlternative name of the database | Dolce | ||||
| URLURL of the database | http://ich.vscht.cz/projects/dolce/viewHome | ||||
| Database maintenance siteSite maintaining the database | |||||
| Country/RegionCountry or region name where the database maintenance site is located | Czech Republic | ||||
| Database descriptionDatabase descirption | Dolce is a database of DNA structure motifs based on an automatic classification method consisting of the combination of supervised and unsupervised approaches. This workflow has been applied to analyze 816 X-ray and 664 NMR DNA structures released till February 2013. Dinucleotides with unassigned conformations are either classified into one of already known 24 classes or into one of six new classes among so far unclassifiable data, which were newly identified and annotated among X-ray structures by authors of this tool. | ||||
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | All (1) | ||||
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
|
||||
| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
|
||||
| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database |
|
||||
| Language(s)Languages in which the contents of the database are displayed | English | ||||
| Operational statusOperational status for the database | Active | ||||
| Link(s) to Downloadable dataLinks to downloadable data | ― | ||||
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ― | ||||
| Link(s) to Terms of useLinks to terms of use of downloadable data | ― | ||||
| Link(s) to "How to use" | ― | ||||
| Contact information of database | ― | ||||
| Link(s) to API / SPARQL endpoint | ― | ||||
| Link to LSDB ArchiveLink to LSDB Archive | ― | ||||
| Link to MEDALS Database listLink to MEDALS Database list | ― | ||||
| Link to TogoTVLink to TogoTV | ― | ||||
| Link to FAIRsharingLink to FAIRsharing | https://fairsharing.org/10.25504/FAIRsharing.jhjnp0 | ||||
| Similar databasesDatabases that are similar to this database. | |||||
| Record maintainerRecord maintainer | See the corresponding part in the FAIRsharing record | ||||
| Record sourceOrganization that originally created the record |
|
||||
| Date of creation of this recordDate of creation of this English record | 2019-03-28 | ||||
| Last update date of this recordLast update date of this English record | 2020-07-09 | ||||
| Record license | Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license |