Database Record
Inactive
fpgp: Flowering Plant Gene Picker
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC01402 | ||||
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| Database nameName of the database | fpgp | ||||
| Alternative nameAlternative name of the database | Flowering Plant Gene Picker | ||||
| URLURL of the database | http://fpgp.dna.affrc.go.jp/ | ||||
| Database maintenance siteSite maintaining the database | NARO (National Agriculture and Food Research Organization) (Link to J-Global) | ||||
| Country/RegionCountry or region name where the database maintenance site is located | Japan | ||||
| Database descriptionDatabase descirption | This database is an annotation pipeline for flowering plant genomes. If users submit a DNA sequence, fpgp predicts exon-intron structures on the basis of full-length cDNA (FLcDNA) evidence, and simultaneously finds protein-coding regions in the predicted transcripts. For the prediction, 10 published plant genome sets are used, and users can download the gene prediction data in those genomes. | ||||
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | Viridiplantae (33090) | ||||
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
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| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
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| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database |
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| Language(s)Languages in which the contents of the database are displayed | English | ||||
| Operational statusOperational status for the database | Inactive | ||||
| Link(s) to Downloadable dataLinks to downloadable data | ― | ||||
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ― | ||||
| Link(s) to Terms of useLinks to terms of use of downloadable data | ― | ||||
| Link(s) to "How to use" | ― | ||||
| Contact information of database | ― | ||||
| Link(s) to API / SPARQL endpoint | ― | ||||
| Link to LSDB ArchiveLink to LSDB Archive | ― | ||||
| Link to MEDALS Database listLink to MEDALS Database list | ― | ||||
| Link to TogoTVLink to TogoTV | ― | ||||
| Link to FAIRsharingLink to FAIRsharing | ― | ||||
| Similar databasesDatabases that are similar to this database. | |||||
| Record maintainerRecord maintainer | Integbio Database Catalog | ||||
| Record sourceOrganization that originally created the record |
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| Date of creation of this recordDate of creation of this English record | 2014-11-18 | ||||
| Last update date of this recordLast update date of this English record | 2014-11-18 | ||||
| Record license | Creative Commons CC0 license |