Database Record
Inactive
GiiB-JST mtSNP: Human Mitochondrial Genome Polymorphism Database
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC00084 | ||||||||
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| Database nameName of the database | GiiB-JST mtSNP | ||||||||
| Alternative nameAlternative name of the database | Human Mitochondrial Genome Polymorphism Database | ||||||||
| URLURL of the database | http://mtsnp.tmig.or.jp/mtsnp/index_e.shtml | ||||||||
| Database maintenance siteSite maintaining the database | Gifu International Institute of Biotechnology (Link to J-Global) | ||||||||
| Country/RegionCountry or region name where the database maintenance site is located | Japan | ||||||||
| Database descriptionDatabase descirption | GiiB was a research and development core institute of biotechnology in Gifu prefecture, and it was closed down in 2012. GiiB-JST mtSNP contains the entire mitochondrial DNA sequences of human and mitochondrial SNPs (mtSNPs) data associated with age-related conditions and energy metabolism. The main content of GiiB-JST mtSNP is information about mtSNPs of individuals belonging to 7 different groups; centenarians, patients with Parkinson's disease, patients with Alzheimer's disease, young obese males, young non-obese males, and type-2 diabetes patients with or without severe vascular involvement. This database provides mtSNP search systems such as alignment programs and secondary-structure prediction data to evaluate the functional differences among sets of mtSNPs. | ||||||||
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | Homo sapiens (9606) | ||||||||
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
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| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
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| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database |
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| Language(s)Languages in which the contents of the database are displayed | Japanese, English | ||||||||
| Operational statusOperational status for the database | Inactive | ||||||||
| Link(s) to Downloadable dataLinks to downloadable data | ― | ||||||||
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ― | ||||||||
| Link(s) to Terms of useLinks to terms of use of downloadable data | ― | ||||||||
| Link(s) to "How to use" | ― | ||||||||
| Contact information of database | ― | ||||||||
| Link(s) to API / SPARQL endpoint | ― | ||||||||
| Link to LSDB ArchiveLink to LSDB Archive | ― | ||||||||
| Link to MEDALS Database listLink to MEDALS Database list | ― | ||||||||
| Link to TogoTVLink to TogoTV | ― | ||||||||
| Link to FAIRsharingLink to FAIRsharing | ― | ||||||||
| Similar databasesDatabases that are similar to this database. | |||||||||
| Record maintainerRecord maintainer | Integbio Database Catalog | ||||||||
| Record sourceOrganization that originally created the record |
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| Date of creation of this recordDate of creation of this English record | 2013-06-17 | ||||||||
| Last update date of this recordLast update date of this English record | 2013-06-17 | ||||||||
| Record license | Creative Commons CC0 license |