Database Record
DGVa: Database of Genomic Variants Archive
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC00260 |
|---|---|
| Database nameName of the database | DGVa |
| Alternative nameAlternative name of the database | Database of Genomic Variants Archive |
| URLURL of the database | http://www.ebi.ac.uk/dgva/ |
| Database maintenance siteSite maintaining the database | EMBL-EBI (European Bioinformatics Institute) |
| Country/RegionCountry or region name where the database maintenance site is located | United Kingdom |
| Database descriptionDatabase descirption | DGVa (Database of Genomic Variants archive) is a repository that offers the storage of, access to and sharing of available genomic structural variants, in all species. This repository receives information from, and supplies data to, a number of resources. The database contains information on variations at the single nucleotide level as well as on variations ranging from tens to thousands of base pairs and more in size. Data on deletions, insertions, translocations and inversions are supplied. These variations are important in the medical field since they probably play a major role in the development of disease. It is also becoming evident that genomic structural variations have an important effect on an individual's characteristics and is therefore of significant value to study and understand, as is the role it has played in the evolution of species. Data can be downloaded as DVF files, searched for in the Ensembl Genome Browser or found in the Database of Genomic Variants. |
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | ― |
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
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| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
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| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database | ― |
| Language(s)Languages in which the contents of the database are displayed | English |
| Operational statusOperational status for the database | Active |
| Link(s) to Downloadable dataLinks to downloadable data | http://www.ebi.ac.uk/dgva/data-download |
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ― |
| Link(s) to Terms of useLinks to terms of use of downloadable data | http://www.ebi.ac.uk/about/terms-of-use |
| Link(s) to "How to use" | ― |
| Contact information of database | ― |
| Link(s) to API / SPARQL endpoint | ― |
| Link to LSDB ArchiveLink to LSDB Archive | ― |
| Link to MEDALS Database listLink to MEDALS Database list | ― |
| Link to TogoTVLink to TogoTV | ― |
| Link to FAIRsharingLink to FAIRsharing | https://fairsharing.org/biodbcore-000628 |
| Similar databasesDatabases that are similar to this database. | |
| Record maintainerRecord maintainer | Integbio Database Catalog |
| Record sourceOrganization that originally created the record |
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| Date of creation of this recordDate of creation of this English record | 2013-06-17 |
| Last update date of this recordLast update date of this English record | 2013-06-17 |
| Record license | Creative Commons CC0 license |