Database Record
Mouse BAC browser
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC00959 |
|---|---|
| Database nameName of the database | Mouse BAC browser |
| Alternative nameAlternative name of the database | ― |
| URLURL of the database | http://analysis2.lab.nig.ac.jp/mouseBrowser/cgi-bin/index.cgi?org=mm |
| Database maintenance siteSite maintaining the database | NBRP Mouse Genome Information Upgrading Program (RIKEN BRC, RIKEN Genomic Sciences Center, and Comparative Genomics Laboratory, National Institute of Genetics) (Link to J-Global) |
| Country/RegionCountry or region name where the database maintenance site is located | Japan |
| Database descriptionDatabase descirption | This site is a browser for finding available BAC clones of the genome of the B6N mouse strain and of the MSM mouse strain, a wild-derived inbred strain that originated from Japanese wild mice. Clicking on a specific chromosome in the provided diagram opens up a detailed chromosome map showing the locations of the clones and where contiguous DNA segments overlap. The number of available mapped BAC clones are 119,451 in B6N and 133,915 in MSM. A keyword search option is provided, whereby the database can be searched for a specific clone by entering the number of the chromosome on which it is located and/or its ID name or number. |
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | Mus musculus (10090) |
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
|
| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
|
| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database | ― |
| Language(s)Languages in which the contents of the database are displayed | English |
| Operational statusOperational status for the database | Active |
| Link(s) to Downloadable dataLinks to downloadable data | ― |
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ― |
| Link(s) to Terms of useLinks to terms of use of downloadable data | ― |
| Link(s) to "How to use" | ― |
| Contact information of database | ― |
| Link(s) to API / SPARQL endpoint | ― |
| Link to LSDB ArchiveLink to LSDB Archive | https://dbarchive.biosciencedbc.jp/jp/mouse-b6n-bac-clone-db/desc.html |
| Link to MEDALS Database listLink to MEDALS Database list | ― |
| Link to TogoTVLink to TogoTV | ― |
| Link to FAIRsharingLink to FAIRsharing | ― |
| Similar databasesDatabases that are similar to this database. | |
| Record maintainerRecord maintainer | Integbio Database Catalog |
| Record sourceOrganization that originally created the record |
|
| Date of creation of this recordDate of creation of this English record | 2013-06-17 |
| Last update date of this recordLast update date of this English record | 2022-01-16 |
| Record license | Creative Commons CC0 license |