Database Record
Conserved Domains and Protein Classification
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC00258 | ||||||||||||||||
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| Database nameName of the database | Conserved Domains and Protein Classification | ||||||||||||||||
| Alternative nameAlternative name of the database | ― | ||||||||||||||||
| URLURL of the database | http://www.ncbi.nlm.nih.gov/Structure/cdd/cdd.shtml | ||||||||||||||||
| Database maintenance siteSite maintaining the database | NCBI (National Center for Biotechnology Information) | ||||||||||||||||
| Country/RegionCountry or region name where the database maintenance site is located | United States | ||||||||||||||||
| Database descriptionDatabase descirption | This site contains annotations and tools for protein domain structures. It is comprised of: (1) Conserved Domain Database (CDD), which contains information on well-annotated multiple sequence alignment models for ancient domains and full-length proteins, (2) CD-Search and Batch CD-Search for search domains in the Conserved Domain Database (CDD) and conserved domains on multiple protein sequences respectively, (3) Subfamily Protein Architecture Labeling Engine (SPARCLE), which is a resource of the functional characterization of protein sequences, (4) Conserved Domain Architecture Retrieval Tool (CDART) for search protein similarities based on domain architecture,r and (5) CDTree for a helper application. | ||||||||||||||||
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | ― | ||||||||||||||||
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
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| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
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| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database |
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| Language(s)Languages in which the contents of the database are displayed | English | ||||||||||||||||
| Operational statusOperational status for the database | Active | ||||||||||||||||
| Link(s) to Downloadable dataLinks to downloadable data | ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/ | ||||||||||||||||
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/README | ||||||||||||||||
| Link(s) to Terms of useLinks to terms of use of downloadable data | https://www.ncbi.nlm.nih.gov/home/about/policies.shtml | ||||||||||||||||
| Link(s) to "How to use" | ― | ||||||||||||||||
| Contact information of database | ― | ||||||||||||||||
| Link(s) to API / SPARQL endpoint | ― | ||||||||||||||||
| Link to LSDB ArchiveLink to LSDB Archive | ― | ||||||||||||||||
| Link to MEDALS Database listLink to MEDALS Database list | ― | ||||||||||||||||
| Link to TogoTVLink to TogoTV | ― | ||||||||||||||||
| Link to FAIRsharingLink to FAIRsharing | https://fairsharing.org/biodbcore-000433 | ||||||||||||||||
| Similar databasesDatabases that are similar to this database. | |||||||||||||||||
| Record maintainerRecord maintainer | Integbio Database Catalog | ||||||||||||||||
| Record sourceOrganization that originally created the record |
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| Date of creation of this recordDate of creation of this English record | 2013-06-17 | ||||||||||||||||
| Last update date of this recordLast update date of this English record | 2013-06-17 | ||||||||||||||||
| Record license | Creative Commons CC0 license |