Database Record
NBRP Ciona Intestinalis: National BioResource Project Ciona Intestinalis
| IDNBDC common database IDs, which should be written in parentheses if there are multiple titles, such as Japanese and English. | NBDC00394 |
|---|---|
| Database nameName of the database | NBRP Ciona Intestinalis |
| Alternative nameAlternative name of the database | National BioResource Project Ciona Intestinalis |
| URLURL of the database | http://marinebio.nbrp.jp |
| Database maintenance siteSite maintaining the database | University of Tsukuba Shimoda Marine Research Center (Link to J-Global) |
| Country/RegionCountry or region name where the database maintenance site is located | Japan |
| Database descriptionDatabase descirption | NBRP Ciona Intestinalis collects, maintains and distributes wild type and transgenic lines of C. intestinalis. 1. Wild type (closed colony) of C. intestinalis are bred and distributed by Kyoto University and The University of Tokyo. 2. The transgenic lines and mutants of C. intestinalis are produced and distributed by University of Tsukuba. CITRES (Ciona Intestinalis Transgenic line RESources) is a database of C. intestinalis resources maintained by University of Tsukuba. This database contains GFP expressed images of transgenic Ciona and lists of strains, DNA constructs, corresponding references and protocols. Users can search resources by expression stages, as well as keywords including vector names, created methods and expression patterns. |
| Organism(s) coveredNCBI Taxonomy names and IDs covered by the database | Ciona intestinalis (7719) |
| Tag - TargetTag to indicate targets for this database such as genome and protein |
Genome/Gene
cDNA/EST
Genetic variation
Epigenetics
DNA
RNA
Protein
Carbohydrate
Lipid
Metabolite
Chemical compound
Drug
Cell/Organelle
Organism
Health/Disease
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| Tag - Information typeTag to indicate information types for this database such as sequence and structure |
Phenotype
Bioresource
Method
Ontology/Terminology/Nomenclature
Environment
Sequence
3D structure
Chemical structure
Expression
Localization
Geographic Distribution
Interaction/Pathway
Taxonomy
Classification
Image/Movie
Bibliography/Documents
Portal
Repository
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| Reference(s) - PubMed ID/DOIPubMed IDs/DOI for papers related to the database | ― |
| Language(s)Languages in which the contents of the database are displayed | Japanese, English |
| Operational statusOperational status for the database | Active |
| Link(s) to Downloadable dataLinks to downloadable data | http://marinebio.nbrp.jp/ciona/download/download.jsp |
| Link(s) to MetaData of downloadable dataLinks to metadata of downloadable data | ― |
| Link(s) to Terms of useLinks to terms of use of downloadable data | ― |
| Link(s) to "How to use" | ― |
| Contact information of database | ― |
| Link(s) to API / SPARQL endpoint | ― |
| Link to LSDB ArchiveLink to LSDB Archive | ― |
| Link to MEDALS Database listLink to MEDALS Database list | ― |
| Link to TogoTVLink to TogoTV | ― |
| Link to FAIRsharingLink to FAIRsharing | ― |
| Similar databasesDatabases that are similar to this database. | |
| Record maintainerRecord maintainer | Integbio Database Catalog |
| Record sourceOrganization that originally created the record |
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| Date of creation of this recordDate of creation of this English record | 2013-06-17 |
| Last update date of this recordLast update date of this English record | 2019-02-04 |
| Record license | Creative Commons CC0 license |